Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_01334 and MPMX20_01335 are separated by 70 nucleotidesMPMX20_01335 and MPMX20_01336 overlap by 4 nucleotidesMPMX20_01336 and MPMX20_01337 are separated by 639 nucleotidesMPMX20_01337 and MPMX20_01338 overlap by 4 nucleotides MPMX20_01334: MPMX20_01334 - Phosphoglucomutase, at 1,391,850 to 1,393,490 _01334 MPMX20_01335: MPMX20_01335 - Putrescine transporter PotE, at 1,393,561 to 1,394,874 _01335 MPMX20_01336: MPMX20_01336 - Inducible ornithine decarboxylase, at 1,394,871 to 1,397,069 _01336 MPMX20_01337: MPMX20_01337 - KDP operon transcriptional regulatory protein KdpE, at 1,397,709 to 1,398,386 _01337 MPMX20_01338: MPMX20_01338 - Sensor protein KdpD, at 1,398,383 to 1,401,070 _01338
Group Condition MPMX20_01334 MPMX20_01335 MPMX20_01336 MPMX20_01337 MPMX20_01338
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -6.6 +0.1 -0.0 -0.1 -0.1
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -6.3 +0.2 +0.0 -0.1 +0.0
mixed community 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -5.7 +0.0 -0.1 -0.1 -0.3
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -5.4 +0.1 -0.1 -0.1 -0.0
motility; inner cut Motility test in 1X LB; 1 day; inner cut; 0.3% agar -5.2 +0.1 -0.0 -0.1 -0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -5.0 -0.1 -0.0 -0.1 +0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.4 -0.1 -0.3 -0.2 -0.2
carbon source Fumarate (C) -5.3 +0.2 +0.1 -0.0 +0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.8 -0.1 +0.1 +0.0 -0.1
carbon source succinate (C) -5.0 +0.0 +0.1 -0.1 +0.2
carbon source L-Asparagine (C) -4.8 -0.1 -0.0 -0.0 +0.2
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.7 -0.1 -0.1 +0.0 +0.0
carbon source D-Alanine (C) -5.0 +0.1 +0.0 -0.0 +0.2
mixed community 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.5 -0.0 -0.0 -0.1 -0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.2 -0.1 -0.0 -0.2 -0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -3.8 -0.2 -0.1 +0.2 -0.6
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.2 -0.2 -0.0 +0.1 -0.1
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.3 +0.1 -0.1 +0.0 -0.1
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -4.4 +0.1 -0.0 +0.0 -0.0
carbon source a-Ketoglutaric (C) -4.6 +0.2 +0.0 -0.2 +0.2
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -3.3 -0.5 -0.4 +0.2 -0.3
carbon source L-Glutamine (C) -4.5 +0.1 +0.1 -0.1 +0.2
carbon source L-Glutamic (C) -4.5 +0.1 +0.1 -0.0 +0.2
carbon source D-Maltose (C) -4.7 +0.2 +0.1 +0.0 +0.3
carbon source D-Galactose (C) -4.4 +0.2 -0.0 +0.0 +0.1
carbon source Citric Acid (C) -4.1 +0.1 -0.0 -0.2 +0.4
carbon source D-Glucuronic Acid (C) -4.2 +0.3 +0.1 +0.0 +0.1
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -3.8 +0.4 -0.2 +0.4 -0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -3.5 -0.1 +0.0 -0.3 +0.8
carbon source D,L-Malic Acid (C) -3.7 +0.2 -0.0 +0.2 +0.5
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