Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_01289 and MPMX20_01290 are separated by 95 nucleotidesMPMX20_01290 and MPMX20_01291 are separated by 105 nucleotidesMPMX20_01291 and MPMX20_01292 are separated by 139 nucleotidesMPMX20_01292 and MPMX20_01293 are separated by 16 nucleotides MPMX20_01289: MPMX20_01289 - Octanoyltransferase, at 1,350,229 to 1,350,870 _01289 MPMX20_01290: MPMX20_01290 - hypothetical protein, at 1,350,966 to 1,351,229 _01290 MPMX20_01291: MPMX20_01291 - D-alanyl-D-alanine carboxypeptidase DacA, at 1,351,335 to 1,352,546 _01291 MPMX20_01292: MPMX20_01292 - Endolytic peptidoglycan transglycosylase RlpA, at 1,352,686 to 1,353,798 _01292 MPMX20_01293: MPMX20_01293 - Peptidoglycan glycosyltransferase MrdB, at 1,353,815 to 1,354,927 _01293
Group Condition MPMX20_01289 MPMX20_01290 MPMX20_01291 MPMX20_01292 MPMX20_01293
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -2.0 -1.3 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.9 -0.3 N.D.
nitrogen source D-Serine (N) N.D. N.D. -2.2 +0.2 N.D.
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.3 -0.7 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.5 -0.5 N.D.
mixed community 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -0.9 -0.7 N.D.
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.0 -0.6 N.D.
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 N.D. N.D. -1.6 +0.0 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.5 -0.1 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.3 -0.3 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.5 +0.0 N.D.
mixed community TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b N.D. N.D. -1.2 -0.3 N.D.
carbon source octanoate (C) N.D. N.D. -1.3 -0.2 N.D.
mixed community TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 N.D. N.D. -1.2 -0.2 N.D.
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -0.9 -0.5 N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 N.D. N.D. -1.4 -0.0 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.1 -0.2 N.D.
mixed community 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021 N.D. N.D. -1.1 -0.2 N.D.
mixed community 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_030 N.D. N.D. -0.9 -0.3 N.D.
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.0 -0.2 N.D.
supernatant mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in LB N.D. N.D. -1.0 -0.2 N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 N.D. N.D. -1.1 -0.1 N.D.
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -0.7 -0.5 N.D.
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 N.D. N.D. -1.1 -0.1 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -1.1 +0.1 N.D.
mixed community 0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 N.D. N.D. -1.0 +0.2 N.D.
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. N.D. -0.9 +0.4 N.D.
carbon source L-Sorbose (C) N.D. N.D. +0.4 +0.8 N.D.
mixed community LB agar plate coculture with Mixed culture; Chryseobacterium gleum TBS_021 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct N.D. N.D. +1.1 +0.1 N.D.
supernatant mutant library grown in Supernatant; Paenibacillus lautus TBS_090 grown in LB N.D. N.D. +1.1 +0.9 N.D.
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