Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_01151 and MPMX20_01152 are separated by 103 nucleotidesMPMX20_01152 and MPMX20_01153 are separated by 73 nucleotidesMPMX20_01153 and MPMX20_01154 are separated by 263 nucleotidesMPMX20_01154 and MPMX20_01155 are separated by 23 nucleotides MPMX20_01151: MPMX20_01151 - HTH-type transcriptional activator RhaS, at 1,212,622 to 1,213,542 _01151 MPMX20_01152: MPMX20_01152 - 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase, at 1,213,646 to 1,214,479 _01152 MPMX20_01153: MPMX20_01153 - HTH-type transcriptional activator RhaS, at 1,214,553 to 1,214,972 _01153 MPMX20_01154: MPMX20_01154 - Multidrug resistance protein MdtE, at 1,215,236 to 1,216,411 _01154 MPMX20_01155: MPMX20_01155 - multidrug efflux RND transporter permease subunit OqxB3, at 1,216,435 to 1,219,587 _01155
Group Condition MPMX20_01151 MPMX20_01152 MPMX20_01153 MPMX20_01154 MPMX20_01155
carbon source propionate (C) +0.3 +0.6 -6.0 +0.2 +0.1
carbon source L-Valine (C) +0.0 -0.1 -2.1 -0.4 +0.1
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -0.1 -1.6 -0.2 +0.0
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 -0.5 -0.5 -0.6 -0.5 +0.3
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.4 -1.1 -0.2 +0.1
carbon source L-Isoleucine (C) -0.3 -0.5 -1.0 +0.0 -0.2
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 +0.4 -0.2 -0.8 -0.2 -0.5
carbon source Ethanol (C) -0.1 +0.1 -1.1 +0.2 -0.3
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 +0.6 +0.3 -1.6 -0.3 +0.2
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.4 -1.0 -0.0 -0.4
mixed community TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 +0.5 -0.4 -1.0 +0.0 +0.2
carbon source D-Tagatose (C) +0.5 -0.4 -0.5 -0.3 +0.1
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.3 +0.6 -0.6 +0.2
mixed community M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 -0.1 -0.7 +0.3 -0.4 +0.5
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.1 -1.2 +0.2 +0.3
mixed community 0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +1.0 -1.1 +0.1 +0.1
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 +0.8 -0.9 +0.2 +0.0 -0.2
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.8 +0.2 -0.2 -0.5 -0.2
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 -0.9 +1.3 +0.1 -0.2
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 +1.0 +0.2 -0.3 -0.5 -0.0
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.4 +0.5 +0.7 -0.1 +0.2
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 -0.4 +0.3 +1.0 -0.0 +0.1
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.0 -0.2 +1.6 -0.1 +0.1
mixed community M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 -0.5 +0.2 +1.5 -0.0 +0.3
mixed community 0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.4 +0.0 +1.3 -0.2 -0.0
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +1.1 +0.4 -0.3 +0.4
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +0.5 +1.0 +0.0 -0.0
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -0.2 +2.4 -0.3 +0.3
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 +1.4 +0.3 +0.1 +0.1 +0.3
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 +1.0 +0.6 +1.0 +0.3 -0.0
remove
MPMX20_01151
plot
remove
MPMX20_01152
plot
remove
MPMX20_01153
remove
MPMX20_01154
plot
remove
MPMX20_01155
plot