Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_01111 and MPMX20_01112 overlap by 8 nucleotidesMPMX20_01112 and MPMX20_01113 are separated by 9 nucleotidesMPMX20_01113 and MPMX20_01114 are separated by 51 nucleotidesMPMX20_01114 and MPMX20_01115 are separated by 812 nucleotides MPMX20_01111: MPMX20_01111 - Outer membrane usher protein SfmD, at 1,169,425 to 1,171,986 _01111 MPMX20_01112: MPMX20_01112 - putative fimbrial-like protein SfmH, at 1,171,979 to 1,172,986 _01112 MPMX20_01113: MPMX20_01113 - putative fimbrial-like protein SfmF, at 1,172,996 to 1,173,520 _01113 MPMX20_01114: MPMX20_01114 - Putative transcriptional regulator, at 1,173,572 to 1,174,204 _01114 MPMX20_01115: MPMX20_01115 - hypothetical protein, at 1,175,017 to 1,175,727 _01115
Group Condition MPMX20_01111 MPMX20_01112 MPMX20_01113 MPMX20_01114 MPMX20_01115
carbon source Glycerol (C) -1.2 -1.7 -1.3 -1.3 -1.0
carbon source Fumarate (C) -1.0 -1.2 -0.9 -1.8 -1.0
carbon source D-Ribose (C) -1.1 -1.0 -1.1 -1.5 -1.0
carbon source D-Xylose (C) -0.8 -1.0 -0.9 -1.3 -0.5
carbon source D,L-Malic Acid (C) -0.7 -1.0 -0.8 -1.2 -0.6
carbon source succinate (C) -0.7 -0.9 -0.9 -1.1 -0.6
mixed community 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 -0.7 -1.2 -0.5 -0.9 -0.6
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.4 -0.6 -0.5 -1.8 -0.4
carbon source Sucrose (C) -0.6 -0.9 -0.9 -0.8 -0.4
carbon source a-Ketoglutaric (C) -0.5 -0.8 -0.7 -1.2 -0.4
carbon source Trisodium citrate (C) -0.7 -0.8 -0.8 -1.0 -0.2
carbon source L-Rhamnose (C) -0.6 -1.0 -0.8 -0.7 -0.5
carbon source L-Malic (C) -0.5 -0.7 -0.7 -1.0 -0.5
carbon source D-Maltose (C) -0.7 -0.7 -0.8 -0.7 -0.4
carbon source D-Glucose (C) -0.6 -0.8 -0.6 -0.8 -0.4
carbon source D-Galactose (C) -0.6 -0.7 -0.6 -0.9 -0.3
carbon source L-Aspartic Acid (C) -0.5 -0.4 -0.8 -1.1 -0.4
carbon source D-Gluconic Acid (C) -0.6 -0.8 -0.6 -0.8 -0.3
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.8 +0.6 +0.9 +1.2
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.8 +0.6 +0.1 +1.2 +0.4
mixed community M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 +0.4 +0.1 +0.7 +0.8 +1.1
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +0.6 +0.2 +1.0 +0.9
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 +0.5 +0.7 +0.2 +1.1 +0.7
mixed community TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 +1.1 +0.2 +1.0 +0.4 +0.7
mixed community M9 plate, 1:1 coculture with Amycolatopsis sp. SAI_101 +1.5 -0.1 +1.1 +0.3 +0.4
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 +1.3 +0.3 +0.9 +0.5 +0.7
mixed community 1X LB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.7 +1.2 +0.6 +0.4 +0.8
mixed community M9 plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.8 +0.7 +0.4 +0.8 +1.1
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 +0.9 +1.0 +1.0 +0.5 +0.9
mixed community M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.5 -0.0 +1.6 +0.9 +1.8
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