Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_01014	MPMX20_01015	MPMX20_01016	MPMX20_01017	MPMX20_01018
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-2.0	-0.6	-0.6	-1.1	-3.0
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	-1.8	+0.2	-1.1	-0.4	-1.7
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-1.3	-0.3	-0.9	+0.2	-2.2
nitrogen source	L-Methionine (N)	-3.8	-0.6	+0.3	+0.4	+0.1
mixed community	1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.1	-1.0	+0.4	-1.7	-1.0
nitrogen source	L-Leucine (N)	-2.3	-0.7	+0.3	-0.5	+0.0
nitrogen source	Thymine (N)	-2.9	+0.9	+0.0	-0.5	-0.0
mixed community	1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040	+0.0	-0.6	-1.1	+0.3	-1.1
nitrogen source	L-Lysine (N)	-2.8	+0.3	+0.2	+0.0	+0.0
mixed community	AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001	-0.2	-3.0	+0.4	+1.0	-0.4
mixed community	M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2	+0.3	+1.7	+0.2	-3.2	-1.3
nitrogen source	L-Histidine (N)	-1.2	+0.0	+0.6	-1.0	-0.4
mixed community	TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	-1.8	+0.3	-1.0	+0.6
carbon source	L-Lactate (C)	-0.1	-0.5	+0.6	-1.0	-0.9
carbon source	D-Alanine (C)	-0.5	+1.0	-0.1	-1.1	-0.5
mixed community	TSB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272	-0.4	+1.4	-0.2	-1.1	-0.5
nitrogen source	Cytosine (N)	-2.3	+1.0	+0.2	+0.6	-0.1
mixed community	0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.2	-1.7	+0.4	+0.5	+0.4
nitrogen source	Parabanic Acid (N)	-1.7	+0.8	+0.1	+0.4	+0.1
mixed community	TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090	+0.0	+1.6	+0.1	-1.9	-0.0
carbon source	L-Isoleucine (C)	+0.3	-1.2	-0.6	+1.1	+0.3
nitrogen source	butyrate (N)	+0.2	+0.8	+0.9	-1.3	-0.2
mixed community	AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001	-0.0	+1.9	-0.1	-1.1	-0.3
nitrogen source	D-Glucosamine Hydrochloride (N)	-1.5	+1.2	+0.3	+0.2	+0.3
mixed community	1X LB plate, 1:1 coculture with Lysobacter soli TBS_075	+0.1	+1.9	+0.3	-0.6	-0.9
nitrogen source	Beta-Lactose (N)	-0.3	+1.6	+0.9	+0.4	+0.2
mixed community	0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2	-0.1	+1.3	+0.4	+2.1	-0.5
carbon source	L-Sorbose (C)	-0.0	+1.5	+0.6	+1.0	+0.1
mixed community	0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010	-0.1	+1.8	-0.3	+1.7	+0.3
mixed community	1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2	+0.1	+0.2	+0.6	+2.1	+0.4