Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_00977	MPMX20_00978	MPMX20_00979	MPMX20_00980	MPMX20_00981
carbon source	Fumarate (C)	-0.2	+0.2	+0.1	-3.2	-0.2
mixed community	1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.2	+0.1	-0.0	-1.3	-1.5
carbon source	D-Lactate (C)	+0.5	-0.7	-0.1	-2.9	+0.3
carbon source	succinate (C)	+0.2	+0.3	+0.0	-3.5	+0.2
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	+0.3	+0.2	-0.2	-2.5	-0.1
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	-0.3	-0.5	-0.3	-1.2
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.0	-0.1	+0.1	-1.6	-0.7
carbon source	L-Glutamic (C)	-0.0	-0.1	+0.4	-2.1	-0.1
carbon source	L-Aspartic Acid (C)	+0.1	+0.1	+0.1	-2.0	-0.3
carbon source	L-Histidine (C)	-0.1	+0.5	+0.1	-2.1	-0.2
carbon source	D-Alanine (C)	+0.4	+0.2	+0.3	-2.2	-0.5
carbon source	D-Tagatose (C)	-0.7	-0.4	+0.3	-0.6	-0.3
carbon source	acetate (C)	-0.2	+0.2	-0.1	-2.0	+0.4
carbon source	L-Asparagine (C)	+0.2	+0.3	-0.2	-1.6	-0.2
mixed community	1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.4	+0.3	-0.4	-1.4	+0.0
mixed community	0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196	-0.2	-0.4	+0.4	-1.0	+0.3
carbon source	propionate (C)	-0.9	+0.3	-1.0	+0.3	+0.6
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.3	+0.7	+0.3	-2.3	+0.4
mixed community	0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090	-1.1	+0.5	-0.5	-0.4	+0.9
mixed community	M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2	+0.4	+0.6	+0.0	-0.8	-0.4
nitrogen source	D-Alanine (N)	+0.4	-0.1	-0.7	+1.0	-0.4
mixed community	M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.3	-1.1	+0.1	+1.0	+0.7
mixed community	1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.2	-0.2	+1.3	-0.9	+0.4
mixed community	M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.4	+0.1	-0.4	-0.6	+1.0
mixed community	1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030	+0.6	-0.0	+0.6	-0.7	+0.3
mixed community	TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.5	-0.4	-0.9	+0.3	+1.4
mixed community	TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.2	-0.1	+0.1	-0.4	+1.6
mixed community	0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	-0.3	+1.6	-0.6	+0.6
mixed community	1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2	+0.4	+0.5	+0.9	-0.4	+0.8
mixed community	M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031	+1.3	+0.2	+0.6	-0.1	+0.6