Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00697 and MPMX20_00698 are separated by 67 nucleotidesMPMX20_00698 and MPMX20_00699 are separated by 227 nucleotidesMPMX20_00699 and MPMX20_00700 are separated by 55 nucleotidesMPMX20_00700 and MPMX20_00701 overlap by 10 nucleotides MPMX20_00697: MPMX20_00697 - HTH-type transcriptional regulator PgrR, at 717,225 to 718,124 _00697 MPMX20_00698: MPMX20_00698 - Energy-dependent translational throttle protein EttA, at 718,192 to 719,859 _00698 MPMX20_00699: MPMX20_00699 - Soluble lytic murein transglycosylase, at 720,087 to 722,024 _00699 MPMX20_00700: MPMX20_00700 - Trp operon repressor, at 722,080 to 722,409 _00700 MPMX20_00701: MPMX20_00701 - Inosine/xanthosine triphosphatase, at 722,400 to 722,915 _00701
Group Condition MPMX20_00697 MPMX20_00698 MPMX20_00699 MPMX20_00700 MPMX20_00701
carbon source L-Isoleucine (C) -0.1 +0.2 +0.3 -2.8 +0.0
mixed community Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 -0.0 +0.1 -0.1 -2.1 -0.2
supernatant mutant library grown in Supernatant; Enterobacter sp. TBS_079 grown in LB -0.0 -0.5 -0.1 -1.7 +0.1
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.01 -0.1 -0.3 -0.2 -1.3 -0.3
supernatant mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in LB -0.0 -1.1 -0.3 -0.9 +0.3
mixed community TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.5 -0.2 -0.5 -1.0 +0.1
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 +0.3 -0.4 -0.3 -1.5 +0.3
carbon source Sucrose (C) -0.1 -0.2 +0.2 -1.4 -0.2
carbon source L-Proline (C) -0.0 +0.6 -0.1 -1.9 -0.1
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 +0.2 -0.4 -0.2 -1.4 +0.3
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.3 +0.2 -0.6 -0.6
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -0.0 -0.9 +0.3 -1.1 +0.3
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 -0.0 -0.7 -0.4 +0.3
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 +0.1 +0.3 +0.2 -1.3 -0.5
mixed community TSB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.1 +0.1 +0.3 -1.0 -0.7
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +0.2 -0.4 -1.3 +0.1
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar +0.1 -0.7 +0.2 -0.8 +0.4
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.5 -0.1 -0.3 -1.1 +0.3
carbon source L-Citrulline (C) +0.4 +0.3 -0.3 -0.6 -0.5
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.1 -0.2 -1.1 +0.5
carbon source octanoate (C) -0.6 +0.5 +0.8 -0.8 -0.3
carbon source L-tyrosine (C) +0.4 +0.1 +0.3 -1.5 +0.3
carbon source casaminos (C) +0.1 +0.4 +0.5 -1.3 +0.0
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.3 +0.7 -1.0 -0.2
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.3 +1.1 -0.2 -0.7
mixed community 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 -0.7 +0.2 -0.5 +0.9 +0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.2 -0.4 -0.7 +0.9 +0.6
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.3 -0.4 +1.1 -0.1
mixed community M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 +0.1 +0.3 +0.7 -0.3 +0.7
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 +1.1 +0.2 +0.7 -0.3 +0.6
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