Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00682 and MPMX20_00683 are separated by 104 nucleotidesMPMX20_00683 and MPMX20_00684 are separated by 46 nucleotidesMPMX20_00684 and MPMX20_00685 are separated by 117 nucleotidesMPMX20_00685 and MPMX20_00686 overlap by 4 nucleotides MPMX20_00682: MPMX20_00682 - Phosphopentomutase, at 700,861 to 702,084 _00682 MPMX20_00683: MPMX20_00683 - Purine nucleoside phosphorylase DeoD-type, at 702,189 to 702,911 _00683 MPMX20_00684: MPMX20_00684 - Protein GltF, at 702,958 to 703,662 _00684 MPMX20_00685: MPMX20_00685 - hypothetical protein, at 703,780 to 704,349 _00685 MPMX20_00686: MPMX20_00686 - Outer membrane usher protein FimD, at 704,346 to 706,760 _00686
Group Condition MPMX20_00682 MPMX20_00683 MPMX20_00684 MPMX20_00685 MPMX20_00686
carbon source Inosine (C) -5.5 -4.8 +0.1 -0.1 +0.1
carbon source Adenosine (C) -3.7 -4.3 +0.0 -0.0 +0.0
carbon source Thymidine (C) -4.8 +0.2 -0.0 +0.3 +0.1
carbon source Cytidine (C) -4.0 -0.1 -0.0 +0.2 +0.0
carbon source Uridine (C) -2.0 +0.2 +0.0 -0.5 +0.0
supernatant mutant library grown in Supernatant; Enterobacter sp. TBS_079 grown in LB -1.3 -0.8 +0.1 -0.0 -0.0
nitrogen source Adenine (N) +4.3 -6.0 -0.1 -0.2 +0.1
supernatant mutant library grown in Supernatant; Enterobacter sp. TBS_079 grown in LB -1.3 -0.6 +0.0 +0.1 +0.0
supernatant mutant library grown in Supernatant; Enterobacter sp. TBS_079 grown in LB -0.9 -0.9 -0.1 +0.2 -0.0
nitrogen source D-Serine (N) -0.5 -0.7 -0.5 +0.2 -0.0
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.2 -1.1 -0.2 -0.2 +0.2
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.4 -0.5 +0.3 +0.0
carbon source L-Sorbose (C) -0.5 -0.5 -0.0 +0.4 -0.1
nitrogen source Uridine (N) -1.1 +0.3 +0.0 +0.3 +0.0
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 +0.5 -0.5 +0.2 -0.2 -0.2
mixed community 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 +0.3 -1.1 -0.0 +0.8 +0.1
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 +0.7 -0.8 -0.1 +0.3 +0.1
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 +0.4 -0.7 +0.4 +0.6 +0.1
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 +0.7 +0.2 +0.4 +0.1
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 +0.7 -0.5 +0.1 +0.3 +0.2
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.1 +0.3 +0.9 +0.2
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +1.1 -0.4 +0.7 -0.1
carbon source Putrescine (C) +0.4 +0.5 +0.2 -0.3 +0.2
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.5 +0.3 -0.2 +0.8 -0.0
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.6 +0.1 +0.7 +0.1
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.1 +0.2 +1.0 +0.4 +0.1
mixed community M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.4 +0.2 +0.3 +1.2 -0.2
mixed community M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.6 +0.7 -0.0 +1.1 +0.0
supernatant mutant library grown in Supernatant; Brevibacillus agri TBS_043 grown in LB +2.0 +0.6 -0.0 +0.2 -0.0
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +3.2 +2.2 -0.1 +0.7 -0.1
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