Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00654 and MPMX20_00655 are separated by 41 nucleotidesMPMX20_00655 and MPMX20_00656 are separated by 67 nucleotidesMPMX20_00656 and MPMX20_00657 overlap by 4 nucleotidesMPMX20_00657 and MPMX20_00658 are separated by 411 nucleotides MPMX20_00654: MPMX20_00654 - Organic hydroperoxide resistance transcriptional regulator, at 679,101 to 679,553 _00654 MPMX20_00655: MPMX20_00655 - HTH-type transcriptional repressor NicS, at 679,595 to 680,236 _00655 MPMX20_00656: MPMX20_00656 - hypothetical protein, at 680,304 to 680,771 _00656 MPMX20_00657: MPMX20_00657 - Inner membrane protein YjjP, at 680,768 to 681,544 _00657 MPMX20_00658: MPMX20_00658 - Putative transcription factor YjjQ, at 681,956 to 682,693 _00658
Group Condition MPMX20_00654 MPMX20_00655 MPMX20_00656 MPMX20_00657 MPMX20_00658
carbon source L-Isoleucine (C) -1.2 +0.0 -0.1 +0.1 -0.4
carbon source D-Raffinose (C) -0.2 +0.1 -0.9 -0.4 +0.0
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.4 -0.7 -0.4 +0.2 +0.1
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 -0.5 -0.3 -0.5 +0.2 -0.2
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.8 +0.6 -0.6 +0.4 -0.7
nitrogen source L-Methionine (N) -0.7 -0.4 +0.0 -0.2 +0.3
carbon source butyrate (C) -0.2 +0.3 -1.1 +0.1 -0.1
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 -0.9 -0.5 +0.6 -0.2 +0.2
mixed community M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.5 +0.6 -1.0 +0.4 -0.0
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.8 -0.3 +0.6 -0.0 -0.0
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 -0.5 -0.3 -0.1 +0.4 +0.3
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +1.1 -0.3 -0.5 -0.0
mixed community 1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 -0.5 +0.1 +1.0 -0.0 -0.1
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 +0.4 -0.5 -0.2 +0.0
mixed community M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.3 -0.4 +0.1 +0.7 +0.1
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.6 +0.3 -0.4 +0.1
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.1 +0.9 +0.5 -0.2
carbon source Ethanol (C) +0.6 -0.2 +0.5 +0.2 -0.0
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.7 +0.5 -0.2 +0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.8 +0.8 -0.3 +0.1
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.1 +1.0 +0.2 +0.2
mixed community 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +1.0 +0.4 -0.1 +0.0
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +0.0 +1.1 -0.1 +0.2
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +1.2 +0.2 +0.3 -0.2 +0.1
mixed community 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2 -0.2 +0.0 +1.6 +0.3 -0.1
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +1.0 -0.1 +0.1 +0.7 +0.1
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 +0.6 -0.0 +0.5 +0.0
mixed community TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +0.4 +1.3 -0.1 +0.1
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 +0.1 +0.3 +0.6 +1.0 +0.1
mixed community 1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.5 +0.9 +0.5 +0.4 +0.0
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