Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_00606	MPMX20_00607	MPMX20_00608	MPMX20_00609	MPMX20_00610
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-2.2	-0.2	+0.1	-0.1	+0.1
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-2.0	-0.2	+0.1	-0.0	-0.0
mixed community	0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090	-0.2	+0.2	-0.2	-0.3	-1.3
carbon source	Carnitine Hydrochloride (C)	-0.8	-0.1	-0.1	-0.1	-0.5
carbon source	a-Ketoglutaric (C)	-0.7	-0.2	+0.1	-0.1	-0.7
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	-2.1	-0.3	+0.3	+0.2	+0.4
carbon source	L-Citrulline (C)	-0.9	-0.0	-0.1	-0.1	-0.4
carbon source	L-Rhamnose (C)	-0.7	-0.2	+0.1	-0.2	-0.4
carbon source	D-Lactate (C)	-0.9	+0.1	+0.1	-0.4	-0.3
carbon source	L-Lactate (C)	-1.0	+0.0	-0.2	+0.1	-0.4
carbon source	Glycerol (C)	-0.5	-0.2	+0.4	-0.4	-0.5
carbon source	Glycine (C)	-0.9	-0.3	-0.0	+0.2	-0.2
carbon source	Xylitol (C)	-1.2	-0.2	+0.2	+0.2	-0.1
carbon source	octanoate (C)	-1.0	-0.1	+0.3	+0.2	-0.4
carbon source	L-Fucose (C)	-0.5	-0.1	+0.0	+0.3	-0.8
carbon source	L-Aspartic Acid (C)	-0.8	-0.1	+0.1	+0.2	-0.4
carbon source	Ethanol (C)	-0.6	-0.2	+0.0	+0.3	-0.4
mixed community	AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001	-0.1	-0.0	-0.2	-1.0	+0.7
mixed community	TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090	-0.2	-0.0	+0.6	-0.2	-0.7
mixed community	1X LB plate, 1:1 coculture with Lysobacter soli TBS_075	-0.6	-0.4	-0.1	+0.3	+0.3
mixed community	TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.1	-0.1	-0.3	-0.5	+0.6
mixed community	TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.4	+0.2	+0.1	-0.7	-0.2
mixed community	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001	-0.6	+0.3	-0.3	-0.2	+0.8
carbon source	L-Isoleucine (C)	-0.4	+0.1	-0.1	+0.3	+0.7
mixed community	TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.8	-0.2	-0.5	+0.1	+0.6
mixed community	0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.2	+0.1	-0.3	-0.1	+0.9
mixed community	0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031	-0.2	-0.0	+0.3	+1.0	-0.2
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.5	-0.1	+0.2	-0.1	+0.6
mixed community	M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2	+0.5	-0.2	+0.5	+0.3	+0.2
mixed community	TSB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.3	-0.0	+0.2	-0.2	+1.1