Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00473 and MPMX20_00474 are separated by 9 nucleotidesMPMX20_00474 and MPMX20_00475 overlap by 8 nucleotidesMPMX20_00475 and MPMX20_00476 are separated by 142 nucleotidesMPMX20_00476 and MPMX20_00477 are separated by 341 nucleotides MPMX20_00473: MPMX20_00473 - 3-keto-L-gulonate-6-phosphate decarboxylase UlaD, at 489,064 to 489,714 _00473 MPMX20_00474: MPMX20_00474 - L-ribulose-5-phosphate 3-epimerase UlaE, at 489,724 to 490,584 _00474 MPMX20_00475: MPMX20_00475 - L-ribulose-5-phosphate 4-epimerase UlaF, at 490,577 to 491,263 _00475 MPMX20_00476: MPMX20_00476 - hypothetical protein, at 491,406 to 491,681 _00476 MPMX20_00477: MPMX20_00477 - 30S ribosomal protein S6, at 492,023 to 492,418 _00477
Group Condition MPMX20_00473 MPMX20_00474 MPMX20_00475 MPMX20_00476 MPMX20_00477
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 -0.3 -0.6 +0.0 N.D.
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 -0.0 -0.2 -0.4 N.D.
nitrogen source Beta-Lactose (N) -0.5 -0.2 -0.1 -0.4 N.D.
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.0 -0.6 +0.2 -0.7 N.D.
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 -0.8 -0.2 +0.2 -0.0 N.D.
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 -0.1 -0.3 +0.4 N.D.
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.1 -0.9 +0.6 N.D.
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 -0.2 -0.2 -0.6 +0.4 N.D.
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.1 -0.7 -0.1 +0.3 N.D.
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.3 -0.2 -0.5 N.D.
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.7 -0.0 -0.1 +0.4 N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.3 -0.4 -0.2 +0.6 N.D.
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 +0.4 -0.1 +0.3 N.D.
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 -0.6 +0.5 -0.1 -0.0 N.D.
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.3 -0.2 +0.5 N.D.
mixed community 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.5 +0.0 +0.2 N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.2 +0.1 -0.3 +0.7 N.D.
carbon source a-Cyclodextrin (C) -0.5 +0.6 -0.0 +0.2 N.D.
carbon source Glucuronamide (C) +0.4 -0.5 +0.2 +0.4 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.4 +0.0 +0.5 N.D.
carbon source Formate (C) -0.5 +0.6 +0.2 +0.2 N.D.
mixed community 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.2 -0.3 +0.7 -0.1 N.D.
carbon source Parabanic Acid (C) +0.4 -0.3 +0.3 +0.2 N.D.
mixed community M9 plate, 1:1 coculture with Brevibacillus agri TBS_043 -0.1 +1.1 -0.2 -0.2 N.D.
mixed community 0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.3 +0.4 +0.2 N.D.
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.2 -0.3 +0.5 N.D.
mixed community 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031 +0.1 +0.3 -0.2 +0.7 N.D.
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 -0.3 +1.1 +0.0 +0.4 N.D.
carbon source Adenosine (C) +0.3 +0.2 +0.3 +0.5 N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.2 +0.3 +0.3 +1.2 N.D.
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