Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00449 and MPMX20_00450 overlap by 50 nucleotidesMPMX20_00450 and MPMX20_00451 are separated by 9 nucleotidesMPMX20_00451 and MPMX20_00452 overlap by 8 nucleotidesMPMX20_00452 and MPMX20_00453 are separated by 85 nucleotides MPMX20_00449: MPMX20_00449 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 463,423 to 463,884 _00449 MPMX20_00450: MPMX20_00450 - N-acetylmuramoyl-L-alanine amidase AmiB, at 463,835 to 465,247 _00450 MPMX20_00451: MPMX20_00451 - DNA mismatch repair protein MutL, at 465,257 to 467,101 _00451 MPMX20_00452: MPMX20_00452 - tRNA dimethylallyltransferase, at 467,094 to 468,044 _00452 MPMX20_00453: MPMX20_00453 - RNA-binding protein Hfq, at 468,130 to 468,441 _00453
Group Condition MPMX20_00449 MPMX20_00450 MPMX20_00451 MPMX20_00452 MPMX20_00453
carbon source L-Histidine (C) N.D. -0.1 +0.0 -3.1 -4.6
nitrogen source Gly-Glu (N) N.D. -0.1 -0.0 -3.4 -3.8
mixed community Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048 N.D. -0.3 -0.2 -1.7 -4.7
carbon source D-Xyl (C) N.D. -0.2 -0.0 -1.7 -4.8
carbon source D-Xyl (C) N.D. +0.1 -0.1 -1.8 -4.7
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.2 -0.3 -1.7 -4.1
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.0 -0.4 -1.9 -3.5
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.5 -0.2 -2.1 -3.8
carbon source D-Fructose (C) N.D. +0.1 -0.1 -1.1 -4.5
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.2 -0.1 -1.6 -4.0
mixed community LB agar plate coculture with Mixed culture; Kribbella shirazensis SAI_226 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct N.D. +0.2 -0.1 -0.5 -5.1
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.01 N.D. +0.1 -0.2 -1.4 -4.0
mixed community Outgrowth from agar plate co-culture with Enterobacter sp. TBS_079 N.D. -0.1 -0.2 -0.9 -4.3
carbon source m-Inositol (C) N.D. +0.2 -0.1 -1.1 -4.4
mixed community Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 N.D. +0.3 -0.2 -0.8 -4.6
carbon source L-Fucose (C) N.D. +0.1 -0.1 -1.0 -4.2
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar N.D. +0.1 +0.1 -1.3 -4.1
supernatant mutant library grown in Supernatant; Enterobacter sp. TBS_079 grown in LB N.D. -0.0 +0.1 -0.6 -4.6
carbon source NAG (C) N.D. +0.1 -0.3 -0.6 -4.4
mixed community LB agar plate coculture with Mixed culture; Chryseobacterium proteolyticum TBS_027 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct N.D. +0.2 -0.1 -1.0 -4.2
carbon source Tween 20 (C) N.D. +0.1 -0.0 -0.8 -4.5
carbon source L-tyrosine (C) N.D. +0.1 +0.1 -1.0 -4.3
carbon source L-Cysteine (C) N.D. +0.0 +0.1 -0.9 -4.3
mixed community TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.5 -0.3 -1.3 -3.8
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 N.D. -0.2 +0.4 -1.0 -4.2
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.3 -0.0 -1.9 -3.1
carbon source Thymine (C) N.D. +0.3 +0.1 -0.8 -4.1
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.6 -0.3 -1.0 -3.8
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 N.D. +0.4 -0.6 -0.8 +4.6
mixed community M9 plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. -0.0 -0.6 -1.8 +6.6
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