Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_00425	MPMX20_00426	MPMX20_00427	MPMX20_00428	MPMX20_00429
carbon source	octanoate (C)	N.D.	N.D.	-0.0	-4.1	+0.3
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	N.D.	N.D.	-1.0	-3.1	+0.5
nitrogen source	Beta-Lactose (N)	N.D.	N.D.	-0.3	-3.5	+0.2
nitrogen source	octanoate (N)	N.D.	N.D.	-0.2	-2.1	-0.0
carbon source	propionate (C)	N.D.	N.D.	-0.8	-1.4	-0.1
nitrogen source	butyrate (N)	N.D.	N.D.	-0.6	-1.5	+0.2
carbon source	Itaconic Acid (C)	N.D.	N.D.	-0.3	-1.7	+0.2
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.4	-1.1	-0.2
nitrogen source	L-Tryptophan (N)	N.D.	N.D.	-0.5	-1.3	+0.1
mixed community	TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.4	-1.0	-0.3
carbon source	Xylitol (C)	N.D.	N.D.	-0.2	-1.3	+0.1
mixed community	TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	+0.9	-1.2	+0.1
mixed community	0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196	N.D.	N.D.	-0.6	-0.9	+1.4
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.5	+0.8	-0.3
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.3	+1.0	-0.5
nitrogen source	Carnitine Hydrochloride (N)	N.D.	N.D.	-0.7	+0.6	+0.3
mixed community	1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.6	+1.1	-0.2
mixed community	M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031	N.D.	N.D.	+0.4	-0.4	+0.9
mixed community	1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046	N.D.	N.D.	-0.3	+1.0	+0.4
mixed community	1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039	N.D.	N.D.	+0.6	-0.3	+0.9
mixed community	1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	+0.1	+1.3	-0.2
mixed community	M9 plate, 1:1 coculture with Bacillus megaterium TBS_037	N.D.	N.D.	-0.0	+1.5	-0.1
mixed community	M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.5	+2.2	-0.1
carbon source	oxalate (C)	N.D.	N.D.	+0.5	+1.0	+0.1
mixed community	TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	+0.8	+0.8	+0.2
mixed community	0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010	N.D.	N.D.	+0.4	-0.2	+1.6
carbon source	Glycerol (C)	N.D.	N.D.	+0.4	+1.3	+0.4
mixed community	TSB plate, 1:1 coculture with Rhizobium pusense TBS_045	N.D.	N.D.	+1.5	-0.5	+1.2
mixed community	M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2	N.D.	N.D.	+0.0	+2.8	+0.1
mixed community	M9 plate, 1:1 coculture with Brevibacillus agri TBS_043	N.D.	N.D.	+0.7	+3.1	+1.1