Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00330 and MPMX20_00331 are separated by 649 nucleotidesMPMX20_00331 and MPMX20_00332 are separated by 32 nucleotidesMPMX20_00332 and MPMX20_00333 are separated by 547 nucleotidesMPMX20_00333 and MPMX20_00334 are separated by 86 nucleotides MPMX20_00330: MPMX20_00330 - 2-keto-3-deoxygluconate permease, at 349,077 to 350,069 _00330 MPMX20_00331: MPMX20_00331 - Proline/betaine transporter, at 350,719 to 352,221 _00331 MPMX20_00332: MPMX20_00332 - hypothetical protein, at 352,254 to 353,156 _00332 MPMX20_00333: MPMX20_00333 - 16S ribosomal RNA, at 353,704 to 355,239 _00333 MPMX20_00334: MPMX20_00334 - tRNA-Glu, at 355,326 to 355,401 _00334
Group Condition MPMX20_00330 MPMX20_00331 MPMX20_00332 MPMX20_00333 MPMX20_00334
carbon source L-Proline (C) +0.0 -0.8 -0.1 N.D. N.D.
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.3 -0.4 N.D. N.D.
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.2 -0.4 N.D. N.D.
nitrogen source L-Methionine (N) +0.0 -0.4 -0.4 N.D. N.D.
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -0.3 -0.3 N.D. N.D.
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB -0.0 -0.5 -0.2 N.D. N.D.
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.0 -0.2 -0.5 N.D. N.D.
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.1 -0.2 -0.4 N.D. N.D.
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.4 -0.2 N.D. N.D.
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.1 -0.5 N.D. N.D.
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.0 +0.1 -0.6 N.D. N.D.
nitrogen source Beta-Lactose (N) +0.1 -0.3 -0.3 N.D. N.D.
mixed community M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.1 -0.2 -0.3 N.D. N.D.
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.2 -0.2 N.D. N.D.
mixed community 1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030 +0.1 +0.0 -0.5 N.D. N.D.
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.2 -0.2 N.D. N.D.
carbon source Carnitine Hydrochloride (C) -0.3 +0.2 -0.2 N.D. N.D.
nitrogen source L-Tryptophan (N) +0.1 +0.1 -0.4 N.D. N.D.
mixed community 0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.2 -0.3 -0.1 N.D. N.D.
mixed community 1X LB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.2 -0.1 -0.3 N.D. N.D.
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 +0.1 +0.2 -0.4 N.D. N.D.
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 +0.3 -0.1 -0.3 N.D. N.D.
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.2 -0.3 N.D. N.D.
mixed community 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.3 +0.5 N.D. N.D.
mixed community TSB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.4 -0.1 -0.2 N.D. N.D.
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 +0.2 +0.4 -0.2 N.D. N.D.
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.2 +0.5 N.D. N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.1 -0.1 +0.6 N.D. N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.1 +0.4 N.D. N.D.
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 +0.2 +0.2 +0.4 N.D. N.D.
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