Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00299 and MPMX20_00300 are separated by 84 nucleotidesMPMX20_00300 and MPMX20_00301 are separated by 30 nucleotidesMPMX20_00301 and MPMX20_00302 overlap by 4 nucleotidesMPMX20_00302 and MPMX20_00303 are separated by 181 nucleotides MPMX20_00299: MPMX20_00299 - hypothetical protein, at 319,555 to 320,241 _00299 MPMX20_00300: MPMX20_00300 - Ribose import binding protein RbsB, at 320,326 to 321,267 _00300 MPMX20_00301: MPMX20_00301 - Ribose import permease protein RbsC, at 321,298 to 322,293 _00301 MPMX20_00302: MPMX20_00302 - Ribose import ATP-binding protein RbsA, at 322,290 to 323,810 _00302 MPMX20_00303: MPMX20_00303 - Sensor histidine kinase RcsC, at 323,992 to 326,313 _00303
Group Condition MPMX20_00299 MPMX20_00300 MPMX20_00301 MPMX20_00302 MPMX20_00303
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.3 -0.9 -0.6 +0.0 -0.1
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 -0.2 -1.1 -0.2 -0.1 -0.2
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 -0.7 -0.2 -0.2 -0.3 -0.1
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.3 -0.4 -0.2 -0.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.4 -0.6 -0.5 +0.1 -0.1
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -0.1 -0.3 -0.6 -0.3
carbon source propionate (C) -0.1 -0.2 -0.5 -0.3 +0.2
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.3 -0.2 -0.1 -0.4
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 +0.1 -0.6 +0.5 -0.1 -0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.4 -0.0 +0.7 +0.0
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.5 -0.4 +0.2 +0.0 -0.2
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.3 +0.6 -0.3 -0.1 -0.4
carbon source oxalate (C) +0.4 -0.3 +0.0 -0.3 +0.3
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.6 +0.2 +0.6 -0.3
mixed community TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.3 -0.2 +0.3 +0.3 +0.3
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 +0.6 -0.1 +0.3 -0.1 -0.3
carbon source L-Sorbose (C) +0.2 +0.4 -0.5 +0.1 +0.2
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.5 +0.5 +0.4 +0.0
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.6 +0.3 -0.0 -0.4
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.7 +0.2 -0.1 +0.2
carbon source D,L-Malic Acid (C) -0.4 +0.7 -0.1 +0.2 +0.2
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.3 +0.6 -0.1 +0.3 +0.2
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.3 +0.6 +0.3 +0.1
nitrogen source D-Tagatose (N) +0.4 +0.2 +0.1 +0.5 -0.1
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.1 -0.1 +0.7 +0.5
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.1 +0.5 +0.3 +0.2 +0.4
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.8 +0.2 +0.5 -0.1
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 -0.0 +1.0 +0.3 +0.1 +0.5
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 +0.0 +1.5 +1.0 +0.0 +0.1
carbon source Glucuronamide (C) +0.1 +1.7 +1.7 +1.6 +1.5
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