Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00269 and MPMX20_00270 are separated by 22 nucleotidesMPMX20_00270 and MPMX20_00271 overlap by 4 nucleotidesMPMX20_00271 and MPMX20_00272 are separated by 75 nucleotidesMPMX20_00272 and MPMX20_00273 are separated by 253 nucleotides MPMX20_00269: MPMX20_00269 - Alanine racemase, biosynthetic, at 286,746 to 287,825 _00269 MPMX20_00270: MPMX20_00270 - Nicotinamide riboside transporter PnuC, at 287,848 to 288,405 _00270 MPMX20_00271: MPMX20_00271 - Trifunctional NAD biosynthesis/regulator protein NadR, at 288,402 to 289,412 _00271 MPMX20_00272: MPMX20_00272 - Aromatic-amino-acid aminotransferase, at 289,488 to 290,681 _00272 MPMX20_00273: MPMX20_00273 - Class B acid phosphatase, at 290,935 to 291,648 _00273
Group Condition MPMX20_00269 MPMX20_00270 MPMX20_00271 MPMX20_00272 MPMX20_00273
nitrogen source L-Phenylalanine (N) +0.2 -0.1 +0.1 -5.1 +0.3
nitrogen source L-Tryptophan (N) -0.2 +0.3 +0.1 -3.1 -0.1
nitrogen source L-Arginine (N) -0.3 -0.5 -0.1 -1.6 -0.1
nitrogen source L-tyrosine (N) +0.2 -0.1 +0.1 -2.5 -0.2
nitrogen source NAG (N) -0.2 -0.4 -0.1 -1.7 +0.2
nitrogen source L-Alanine (N) -0.2 -0.5 -0.0 -1.1 -0.1
nitrogen source D-Serine (N) -0.2 -0.4 -0.1 -1.3 +0.2
carbon source L-Phenylalanine (C) +0.1 +0.4 -0.1 -2.4 +0.3
nitrogen source L-Citrulline (N) +0.1 +0.0 +0.1 -2.3 +0.4
nitrogen source Gly-DL-Asp (N) +0.1 -0.6 -0.2 -1.0 +0.1
nitrogen source L-Asparagine (N) +0.2 -0.0 +0.1 -1.8 +0.1
nitrogen source Uridine (N) -0.1 -0.2 +0.3 -1.1 -0.3
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 +0.4 +0.2 -1.5 -0.0
carbon source L-Glutamine (C) +0.1 +0.0 -0.0 -1.6 +0.4
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 -0.3 -0.0 -0.7 -0.5
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 +0.5 +0.3 +0.0 -0.6 -1.2
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.3 -0.5 -0.7 -0.3
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.9 -0.5 -0.5 -0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.3 -0.3 +0.3 -0.6 +0.3
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +0.2 +0.1 -0.7 -0.7
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 -0.2 -0.3 -0.3 -0.3
carbon source L-tyrosine (C) -0.2 +0.6 -0.0 -1.0 +0.2
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +0.1 +0.4 -0.7 -0.4
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.2 -0.3 +0.7 -0.5 +0.5
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.7 +0.5 -0.5 -0.2
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +0.5 -0.6 -0.7 +0.9
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.8 +1.1 -0.4 -0.2 -0.3
mixed community M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.3 -0.1 +0.0 +0.3 +1.3
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 +0.8 +0.0 -0.4 +0.1
nitrogen source L-Histidine (N) +0.1 -0.4 +0.1 +11.7 -0.1
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