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Protein
Homologs
Fitness for 5 genes in
Enterobacter sp. TBS_079
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX20_00239 and MPMX20_00240 are separated by 92 nucleotides
MPMX20_00240 and MPMX20_00241 are separated by 375 nucleotides
MPMX20_00241 and MPMX20_00242 are separated by 367 nucleotides
MPMX20_00242 and MPMX20_00243 are separated by 118 nucleotides
MPMX20_00239: MPMX20_00239 - Pantothenate precursors transporter PanS, at 255,091 to 256,035
_00239
MPMX20_00240: MPMX20_00240 - Lysine-sensitive aspartokinase 3, at 256,128 to 257,477
_00240
MPMX20_00241: MPMX20_00241 - Glucose-6-phosphate isomerase, at 257,853 to 259,502
_00241
MPMX20_00242: MPMX20_00242 - hypothetical protein, at 259,870 to 260,112
_00242
MPMX20_00243: MPMX20_00243 - putative lipoprotein GfcB, at 260,231 to 260,869
_00243
Group
Condition
MPMX20
_00239
MPMX20
_00240
MPMX20
_00241
MPMX20
_00242
MPMX20
_00243
motility; outer cut
Motility test in 1X LB; 1 day; outer cut; 0.3% agar
+0.1
-2.2
-4.8
+0.1
-0.2
motility; outer cut
Motility test in 1X LB; 1 day; outer cut; 0.3% agar
-0.0
-1.8
-3.8
+0.1
+0.0
carbon source
D-Cellobiose (C)
+0.2
-0.6
-4.7
+0.2
+0.1
carbon source
L-Asparagine (C)
+0.1
-0.1
-4.8
+0.1
+0.0
carbon source
D-Salicin (C)
+0.2
-0.3
-4.3
+0.2
-0.0
carbon source
D-Trehalose (C)
-0.1
-0.5
-3.9
+0.2
-0.0
carbon source
succinate (C)
-0.0
-0.2
-4.0
+0.0
+0.2
motility; inner cut
Motility test in 1X LB; 1 day; inner cut; 0.3% agar
+0.1
-0.4
-3.5
-0.1
-0.1
mixed community
AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001
+0.1
-2.4
-1.8
-0.1
+0.3
carbon source
L-Proline (C)
+0.2
-0.3
-4.2
+0.2
+0.2
carbon source
Trisodium citrate (C)
+0.2
-0.5
-3.7
-0.1
+0.1
carbon source
Glycerol (C)
+0.4
-0.6
-3.9
+0.1
+0.2
carbon source
Fumarate (C)
+0.3
-0.2
-4.2
+0.2
+0.1
carbon source
D-Glucuronic Acid (C)
+0.1
-0.6
-3.5
+0.2
+0.1
carbon source
Citric Acid (C)
+0.3
-0.5
-3.9
+0.3
+0.0
carbon source
D-Maltose (C)
+0.1
-0.5
-3.3
+0.1
+0.0
carbon source
L-Malic (C)
+0.1
-0.4
-3.7
+0.2
+0.1
carbon source
Glucuronamide (C)
+0.1
-0.2
-3.6
+0.1
-0.0
carbon source
L-Glutamic (C)
+0.1
-0.6
-3.4
+0.2
+0.2
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-0.5
-3.4
+0.1
+0.1
carbon source
D-Serine (C)
+0.2
-0.1
-3.7
+0.1
+0.1
mixed community
AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001
+0.1
-2.1
-1.7
+0.2
+0.1
carbon source
L-Histidine (C)
+0.2
-0.1
-3.6
+0.1
+0.0
carbon source
a-Ketoglutaric (C)
+0.1
-0.7
-2.6
+0.3
-0.4
carbon source
D-Galacturonic Acid (C)
+0.5
-0.4
-3.1
+0.1
-0.1
carbon source
D-Alanine (C)
+0.3
-0.2
-3.5
+0.1
+0.2
carbon source
L-Rhamnose (C)
+0.5
-0.5
-3.4
+0.5
-0.1
carbon source
Sucrose (C)
+0.5
-0.4
-3.0
+0.1
-0.1
carbon source
L-Lactate (C)
+0.5
-0.6
-2.8
+0.2
-0.1
in planta
Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
+0.3
+0.1
-3.0
+0.7
-0.3
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