Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00165 and MPMX20_00166 are separated by 71 nucleotidesMPMX20_00166 and MPMX20_00167 are separated by 103 nucleotidesMPMX20_00167 and MPMX20_00168 overlap by 1 nucleotidesMPMX20_00168 and MPMX20_00169 overlap by 8 nucleotides MPMX20_00165: MPMX20_00165 - Xylose isomerase, at 171,015 to 172,400 _00165 MPMX20_00166: MPMX20_00166 - Xylulose kinase, at 172,472 to 173,926 _00166 MPMX20_00167: MPMX20_00167 - hypothetical protein, at 174,030 to 174,569 _00167 MPMX20_00168: MPMX20_00168 - HTH-type transcriptional regulator CdhR, at 174,569 to 175,489 _00168 MPMX20_00169: MPMX20_00169 - O-acetyltransferase WecH, at 175,482 to 176,477 _00169
Group Condition MPMX20_00165 MPMX20_00166 MPMX20_00167 MPMX20_00168 MPMX20_00169
carbon source D-Xyl (C) -6.6 -6.6 +0.2 -0.2 +0.2
carbon source D-Xyl (C) -5.8 -6.4 -0.0 +0.0 -0.1
carbon source D-Xyl (C) -6.0 -5.1 +0.2 +0.1 +0.0
carbon source D-Xylose (C) -4.5 -4.1 -0.3 -0.3 -0.0
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 +0.0 -0.0 -0.7 -0.9 -0.4
carbon source propionate (C) -0.1 +0.2 -1.1 +0.5 -0.4
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 +0.1 +0.1 +0.3 -0.5 -0.7
mixed community 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.2 +0.3 -0.3 -0.6
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 +0.1 -0.4 +0.2 -0.5 -0.1
mixed community M9 plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.0 -0.1 +0.7 -0.4 -0.4
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.1 -0.2 -0.2 -0.4 +0.5
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.1 -0.5 -0.1 +0.6
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.2 -0.5 +0.0 +0.5 +0.3
carbon source Carnitine Hydrochloride (C) +0.1 +0.2 -0.6 +0.5 -0.0
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.4 -0.6 -0.1 +0.4
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 +0.2 +0.0 +0.6 -0.5
carbon source D-Tagatose (C) +0.0 -0.4 +0.5 +0.2 +0.2
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.1 -0.4 +0.3 +0.4
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.1 -0.2 +1.0 -0.2
mixed community 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.1 -0.2 +0.5 -0.2 +0.3
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 -0.1 +0.4 -0.2 +0.5 +0.1
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 +0.0 +0.1 +0.4 +0.5 -0.4
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.1 +0.1 +0.9 +0.1 -0.3
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.2 +0.9 -0.1 +0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.6 +0.1 -0.2 +0.4
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.1 +0.4 -0.1 +0.7
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.1 +1.0 +0.6 -0.1 +0.0
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.3 +1.0 +0.4 +0.1
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 -0.0 +1.6 -0.3 +0.9
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1 -0.1 -0.2 +1.5 +1.5 +0.1
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