Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00053 and MPMX20_00054 are separated by 293 nucleotidesMPMX20_00054 and MPMX20_00055 are separated by 27 nucleotidesMPMX20_00055 and MPMX20_00056 are separated by 131 nucleotidesMPMX20_00056 and MPMX20_00057 overlap by 1 nucleotides MPMX20_00053: MPMX20_00053 - PTS system cellobiose-specific EIIB component, at 52,902 to 53,216 _00053 MPMX20_00054: MPMX20_00054 - Catabolite control protein A, at 53,510 to 54,460 _00054 MPMX20_00055: MPMX20_00055 - hypothetical protein, at 54,488 to 54,784 _00055 MPMX20_00056: MPMX20_00056 - Outer membrane protein OprM, at 54,916 to 56,280 _00056 MPMX20_00057: MPMX20_00057 - Multidrug resistance protein MexB, at 56,280 to 59,390 _00057
Group Condition MPMX20_00053 MPMX20_00054 MPMX20_00055 MPMX20_00056 MPMX20_00057
carbon source L-Valine (C) -0.9 -0.4 -0.4 -0.9 -0.2
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 -0.2 -1.5 -1.0 +0.0 +0.0
carbon source D-Lactate (C) -0.3 -1.3 -0.5 -0.4 -0.1
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.4 -1.5 -0.4 -0.2 +0.0
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.4 -1.2 -0.8 -0.1 +0.2
carbon source Fumarate (C) -0.2 -2.0 +0.2 -0.1 -0.1
mixed community 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.0 -1.0 -0.5 -0.4 -0.2
carbon source Formate (C) -0.8 -0.5 -0.8 +0.1 -0.0
carbon source propionate (C) -0.2 -0.1 -1.7 -0.1 +0.2
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -1.2 -0.8 +0.1 +0.1
carbon source L-Threonine (C) -0.8 -0.5 +0.3 -0.5 -0.3
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.8 -0.4 -0.7 -0.1
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 -0.3 -1.1 +0.3 -0.6 +0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.3 -2.1 +0.4 +0.5 -0.1
mixed community M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 -0.4 -1.0 +0.3 -0.5 -0.0
carbon source Putrescine (C) -0.2 -0.4 -1.4 +0.4 -0.0
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.6 -1.4 +0.4 +0.1
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 -0.4 -0.8 -0.5 +0.3 +0.1
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 +0.4 -0.3 -1.3 +0.2 +0.1
mixed community M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030 +0.3 -0.9 -0.3 -0.3 +0.3
mixed community 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 +0.8 -0.7 +0.4 -1.0 +0.1
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -1.2 +0.6 +0.1 +0.2
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 +0.6 -0.8 +0.4 -0.4 -0.0
mixed community 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.8 -0.1 +1.1 -0.1
mixed community M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b +0.1 -0.8 +0.7 -0.3 +0.2
mixed community TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b -0.0 -1.1 +1.0 -0.0 +0.6
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 +0.5 +0.4 +0.5 -0.4 +0.4
carbon source Beta-Lactose (C) -0.5 +2.9 -0.2 +0.0 -0.1
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 +1.7 +0.2 -0.0 +0.1
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.1 +2.1 +0.3 +0.4
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