Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_00023 and MPMX20_00024 are separated by 17 nucleotidesMPMX20_00024 and MPMX20_00025 are separated by 204 nucleotidesMPMX20_00025 and MPMX20_00026 are separated by 85 nucleotidesMPMX20_00026 and MPMX20_00027 overlap by 98 nucleotides MPMX20_00023: MPMX20_00023 - D-serine dehydratase, at 23,505 to 24,797 _00023 MPMX20_00024: MPMX20_00024 - D-serine transporter DsdX, at 24,815 to 26,152 _00024 MPMX20_00025: MPMX20_00025 - HTH-type transcriptional regulator DsdC, at 26,357 to 27,283 _00025 MPMX20_00026: MPMX20_00026 - hypothetical protein, at 27,369 to 28,457 _00026 MPMX20_00027: MPMX20_00027 - Multidrug resistance protein D, at 28,360 to 29,544 _00027
Group Condition MPMX20_00023 MPMX20_00024 MPMX20_00025 MPMX20_00026 MPMX20_00027
carbon source D-Serine (C) -4.9 -0.9 -2.6 +0.0 -0.0
nitrogen source D-Serine (N) -4.3 +1.4 -2.5 -0.3 -0.1
carbon source L-Serine (C) -1.3 -0.6 -0.3 -0.1 -0.2
nitrogen source L-Serine (N) -1.5 +0.0 -0.3 -0.1 -0.2
carbon source L-Malic (C) -0.2 -0.2 -0.3 -0.7 -0.4
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -0.4 -0.1 -0.1 -0.4 -0.8
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 -0.5 -0.5 +0.2 -0.0
mixed community TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2 -0.7 -0.2 +0.1 -0.6 -0.1
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.2 -0.4 +0.4 +0.3 -0.2
nitrogen source Carnitine Hydrochloride (N) +0.4 +0.1 -0.3 -1.0 -0.2
nitrogen source D-Tagatose (N) +0.4 -0.4 -0.0 -0.3 -0.5
mixed community RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041 +0.3 +0.0 +0.1 -0.9 -0.4
carbon source octanoate (C) -0.4 +0.1 -1.1 +0.2 +0.4
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 -0.2 +0.3 +0.3 -0.5 -0.7
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 -0.3 -0.4 +0.5 +0.3
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 -0.9 +0.0 +0.6 -0.1 -0.1
nitrogen source L-Asparagine (N) +0.7 -0.1 +0.1 -0.4 -0.5
mixed community LB plate, 1:1 coculture with Chryseobacterium_gleum_TBS_030 -0.7 +0.2 -0.3 +0.1 +0.6
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.9 -0.2 +0.5 +0.5 +0.1
mixed community M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b -0.3 +0.1 +0.4 -0.6 +0.4
mixed community 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 +0.5 +0.1 +0.3 +0.1
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 -0.6 +0.3 -0.2 +0.2
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 -1.1 +0.0 +0.9 -0.0 +0.7
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 -0.2 +0.5 -0.7 +0.7 +0.2
mixed community RCH2_defined_glucose plate, 1:1 coculture with Chryseobacterium_gleum_TBS_030 +0.1 +0.1 +0.8 +0.2 -0.6
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.3 +0.7 +0.1 +0.1
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 +0.1 +1.0 +0.5 +0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.0 +0.8 +0.5 +0.4
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.5 -0.1 +0.8 +1.1
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.6 -0.3 +0.5 +0.4 +0.8
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