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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS05125 and MMP_RS05130 are separated by 379 nucleotides
MMP_RS05130 and MMP_RS09015 are separated by 57 nucleotides
MMP_RS09015 and MMP_RS05135 are separated by 28 nucleotides
MMP_RS05135 and MMP_RS05140 are separated by 118 nucleotides
MMP_RS05125: MMP_RS05125 - D-aminoacyl-tRNA deacylase, at 977,591 to 978,355
_RS05125
MMP_RS05130: MMP_RS05130 - DUF2226 domain-containing protein, at 978,735 to 980,321
_RS05130
MMP_RS09015: MMP_RS09015 - hypothetical protein, at 980,379 to 980,537
_RS09015
MMP_RS05135: MMP_RS05135 - hypothetical protein, at 980,566 to 981,087
_RS05135
MMP_RS05140: MMP_RS05140 - helix-turn-helix transcriptional regulator, at 981,206 to 981,406
_RS05140
Group
Condition
MMP
_RS05125
MMP
_RS05130
MMP
_RS09015
MMP
_RS05135
MMP
_RS05140
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
+0.0
-0.1
N.D.
-0.2
-2.1
nutrient t2
H2 deepwell vitamin FREE
+0.1
-0.6
N.D.
-0.7
-0.9
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
-0.1
-1.1
N.D.
-0.5
-0.5
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations
-1.7
-0.0
N.D.
-0.0
-0.0
nitrogen source
H2 N-free with 10mM NAG
-0.7
-0.5
N.D.
+0.2
-0.9
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
+0.1
-1.1
N.D.
-0.4
-0.3
nutrient t2
H2 deepwell acetate FREE
-0.1
-0.7
N.D.
-0.7
-0.3
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations
-1.7
+0.1
N.D.
+0.0
-0.0
nitrogen source
H2 N-free with 10mM Glycine
+0.2
-0.4
N.D.
-0.2
-1.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
+0.3
-0.1
N.D.
+0.1
-1.7
stress
McCas_H2_complete sulfate 125 mM
-0.1
-1.0
N.D.
-0.7
+0.3
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
-0.0
-1.2
N.D.
-0.6
+0.6
stress
McCas_H2_complete Chloride 250 mM
-0.6
-0.6
N.D.
-0.4
+0.5
stress
McCas_formate_complete Calcium Chloride Dihydrate 166.666666666667 mM
-1.3
-0.0
N.D.
+0.1
+0.3
stress
McCas_H2_complete Rifampicin 0.5 mM
-0.2
-1.0
N.D.
-0.0
+0.4
stress
McCas_H2_complete 8-hydroxy-nitroquinolone 0.0166666666666667 mM
-0.3
-0.7
N.D.
-0.4
+0.6
stress
McCas_H2_complete Antimycin A 0.01 mM
-0.6
-1.0
N.D.
-0.3
+1.3
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
-0.1
-1.0
N.D.
-0.2
+0.7
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
+0.3
-0.7
N.D.
-0.5
+0.4
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
+0.0
-1.0
N.D.
-0.4
+0.9
stress
McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM
-0.5
-0.4
N.D.
-0.1
+0.7
stress
McCas_H2_complete Irgasan 0.025 mM
-0.6
-0.2
N.D.
-0.0
+1.0
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
-0.1
-0.6
N.D.
-0.1
+1.0
stress
McCas_H2_complete Lithium chloride 250 mM
+0.2
-0.6
N.D.
-0.2
+1.1
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
-0.3
-0.4
N.D.
-0.2
+1.4
stress
McCas_H2_complete Chloride 250 mM
-0.2
-0.5
N.D.
-0.3
+1.6
stress
McCas_formate_complete sulfate 125 mM
-0.7
+0.2
N.D.
+0.0
+1.1
stress
McCas_H2_complete Chloride 250 mM
-0.5
-0.4
N.D.
+0.0
+1.7
stress
McCas_H2_complete metronidazole 0.000833333333333333
+0.1
-0.7
N.D.
-0.3
+1.8
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
-0.3
-0.2
N.D.
-0.1
+1.6
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