Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS08700 and MMP_RS08705 are separated by 12 nucleotidesMMP_RS08705 and MMP_RS08710 are separated by 1 nucleotidesMMP_RS08710 and MMP_RS08715 are separated by 212 nucleotidesMMP_RS08715 and MMP_RS08720 are separated by 29 nucleotides MMP_RS08700: MMP_RS08700 - hypothetical protein, at 1,629,235 to 1,629,918 _RS08700 MMP_RS08705: MMP_RS08705 - sulfopyruvate decarboxylase subunit beta, at 1,629,931 to 1,630,488 _RS08705 MMP_RS08710: MMP_RS08710 - HisA/HisF family protein, at 1,630,490 to 1,631,158 _RS08710 MMP_RS08715: MMP_RS08715 - formylmethanofuran dehydrogenase subunit B, at 1,631,371 to 1,632,675 _RS08715 MMP_RS08720: MMP_RS08720 - 4Fe-4S binding protein, at 1,632,705 to 1,633,892 _RS08720
Group Condition MMP_RS08700 MMP_RS08705 MMP_RS08710 MMP_RS08715 MMP_RS08720
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations +0.5 -1.4 N.D. -7.2 -6.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations +0.7 -1.3 N.D. -7.1 -6.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations +0.6 -0.7 N.D. -7.3 -6.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations +0.4 -0.5 N.D. -7.3 -6.5
nitrogen source H2 N-free with 10mM L-Lysine -0.0 -1.9 N.D. -6.5 -5.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations +0.3 -0.0 N.D. -7.2 -6.5
nitrogen source H2 N-free with 10mM L-Arginine +0.4 -2.0 N.D. -6.5 -5.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations +0.6 -0.1 N.D. -7.2 -6.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations +0.8 +0.2 N.D. -7.4 -6.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 10 generations +0.4 -0.5 N.D. -7.5 -5.4
nitrogen source H2 N-free with 2mM Thymine +0.0 -1.8 N.D. -6.3 -5.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations +0.6 -0.0 N.D. -7.2 -6.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.2 -0.2 N.D. -6.5 -6.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.3 -0.1 N.D. -6.8 -6.0
nitrogen source H2 N-free with 10mM Putrescine +0.4 -2.0 N.D. -5.6 -5.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +0.5 -0.2 N.D. -6.8 -6.0
nitrogen source H2 N-free with 10mM L-Citrulline +0.3 -2.0 N.D. -5.1 -5.6
nitrogen source H2 N-free with 10mM L-Proline +0.3 -1.5 N.D. -6.2 -4.9
nitrogen source H2 N-free with 10mM L-Methionine +0.3 -2.0 N.D. -5.9 -4.7
nutrient t2 Formate deepwell acetate and casamino FREE +0.2 -0.4 N.D. -6.0 -5.8
nitrogen source H2 N-free with 10mM L-Leucine +0.4 -2.0 N.D. -6.5 -3.9
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.1 -0.2 N.D. -6.6 -5.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations +0.2 -0.6 N.D. -5.0 -6.6
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -0.7 N.D. -5.7 -5.6
nitrogen source H2 N-free with 10mM L-Ornithine +0.3 -1.8 N.D. -5.0 -5.3
nitrogen source H2 N-free with 10mM D-glucosamine +0.3 -1.6 N.D. -5.1 -5.4
nitrogen source H2 N-free with 10mM L-Methionine +0.4 -1.8 N.D. -5.8 -4.2
nitrogen source H2 N-free with 10mM L-Methionine +0.5 -1.2 N.D. -5.9 -4.7
stress McCas_H2_complete sulfate 125 mM -0.2 +1.1 N.D. -6.3 -5.6
rich t2 Formate McCas deepwell complete +0.1 +0.5 N.D. -5.8 -5.7
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