Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS08685 and MMP_RS08690 are separated by 16 nucleotidesMMP_RS08690 and MMP_RS08695 are separated by 17 nucleotidesMMP_RS08695 and MMP_RS08700 are separated by 10 nucleotidesMMP_RS08700 and MMP_RS08705 are separated by 12 nucleotides MMP_RS08685: MMP_RS08685 - hypothetical protein, at 1,627,785 to 1,627,982 _RS08685 MMP_RS08690: MMP_RS08690 - RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5, at 1,627,999 to 1,629,000 _RS08690 MMP_RS08695: MMP_RS08695 - ferredoxin family protein, at 1,629,018 to 1,629,224 _RS08695 MMP_RS08700: MMP_RS08700 - hypothetical protein, at 1,629,235 to 1,629,918 _RS08700 MMP_RS08705: MMP_RS08705 - sulfopyruvate decarboxylase subunit beta, at 1,629,931 to 1,630,488 _RS08705
Group Condition MMP_RS08685 MMP_RS08690 MMP_RS08695 MMP_RS08700 MMP_RS08705
nitrogen source H2 N-free with 10mM Cytidine +0.1 -1.3 N.D. +0.7 -2.7
nitrogen source H2 N-free with 10mM L-Methionine +0.1 -1.6 N.D. +0.3 -2.0
nitrogen source H2 N-free with 10mM L-Citrulline +0.1 -0.9 N.D. +0.2 -2.4
nitrogen source H2 N-free with 10mM L-Valine +0.3 -1.2 N.D. +0.2 -2.4
nitrogen source H2 N-free with 10mM L-Methionine +0.1 -1.5 N.D. +0.4 -1.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -0.2 -1.8 N.D. +0.5 -1.4
nitrogen source H2 N-free with 10mM L-Lysine +0.3 -1.1 N.D. -0.0 -1.9
nitrogen source H2 N-free with 2.5mM Cytosine +0.1 -0.8 N.D. +0.3 -2.4
nitrogen source H2 N-free with 2.5mM Cytosine +0.2 -0.6 N.D. +0.3 -2.5
nitrogen source H2 N-free with 2mM Thymine +0.3 -0.7 N.D. +0.1 -2.3
nitrogen source H2 N-free with 10mM L-Lysine +0.3 -1.0 N.D. +0.3 -2.2
nitrogen source H2 N-free with 10mM L-Arginine +0.0 -1.0 N.D. +0.4 -2.0
nitrogen source H2 N-free with 10mM Cytidine +0.3 -0.9 N.D. +0.3 -2.2
nitrogen source H2 N-free with 10mM L-Valine +0.1 -0.9 N.D. +0.5 -2.1
nitrogen source H2 N-free with 10mM L-Leucine +0.2 -0.9 N.D. +0.4 -2.0
nitrogen source N2 fixation, H2 media +0.2 -0.7 N.D. +0.4 -2.2
nitrogen source H2 N-free with 10mM L-Phenylalanine +0.3 -1.1 N.D. +0.5 -1.9
nitrogen source H2 N-free with 10mM L-Aspartic Acid +0.3 -0.6 N.D. +0.3 -2.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -0.0 -2.1 N.D. +0.6 -0.7
nitrogen source H2 N-free with 10mM Gly-Glu +0.2 -0.9 N.D. +0.5 -2.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -0.0 -1.7 N.D. +0.7 -1.3
stress Formate 100 mM hypophosphite -0.6 -2.3 N.D. +0.7 +0.1
nitrogen source N2 fixation, H2 media +0.3 -0.7 N.D. +0.5 -2.0
nitrogen source H2 N-free with 10mM L-Leucine +0.4 -1.0 N.D. +0.5 -1.8
nitrogen source H2 N-free with 5mM Inosine +0.3 -1.1 N.D. +0.7 -1.7
nitrogen source H2 N-free with 10mM Gly-Glu +0.3 -0.7 N.D. +0.6 -1.8
stress Formate 100 mM hypophosphite -0.8 -2.4 N.D. +1.3 +0.3
stress Formate 100 mM hypophosphite -0.7 -2.2 N.D. +1.8 +0.3
nitrogen source H2 N-free with 10mM NAG +0.5 +1.1 N.D. +0.5 -1.7
nitrogen source H2 N-free with 10mM L-tyrosine -0.2 +2.1 N.D. +0.1 -1.4
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