Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS08365 and MMP_RS08370 are separated by 25 nucleotidesMMP_RS08370 and MMP_RS08375 are separated by 152 nucleotidesMMP_RS08375 and MMP_RS08380 are separated by 2 nucleotidesMMP_RS08380 and MMP_RS08385 are separated by 163 nucleotides MMP_RS08365: MMP_RS08365 - energy conserving hydrogenase EhbF, at 1,570,763 to 1,572,211 _RS08365 MMP_RS08370: MMP_RS08370 - cation:proton antiporter subunit C, at 1,572,237 to 1,572,593 _RS08370 MMP_RS08375: MMP_RS08375 - ATP-binding cassette domain-containing protein, at 1,572,746 to 1,574,395 _RS08375 MMP_RS08380: MMP_RS08380 - phosphatase PAP2 family protein, at 1,574,398 to 1,574,946 _RS08380 MMP_RS08385: MMP_RS08385 - ABC transporter substrate-binding protein, at 1,575,110 to 1,575,832 _RS08385
Group Condition MMP_RS08365 MMP_RS08370 MMP_RS08375 MMP_RS08380 MMP_RS08385
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -4.4 -2.7 N.D. +0.6 +0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations -0.9 -5.4 N.D. +0.1 +0.4
stress McCas_H2_complete Chlorite 1.25 mM -0.2 -5.3 N.D. -0.1 -0.1
nutrient t2 H2 deepwell acetate and vitamin FREE -2.1 -3.4 N.D. +0.1 -0.2
stress McCas_H2_complete Hydroxylamine 1.04166666666667 mM -0.6 -5.2 N.D. +0.2 +0.2
nutrient t2 H2 deepwell acetate and casamino FREE -1.2 -4.7 N.D. -0.0 +0.8
nutrient t2 H2 deepwell acetate and vitamin FREE -1.6 -4.5 N.D. +0.4 +0.7
nutrient t2 H2 deepwell casamino FREE -1.9 -3.7 N.D. +0.1 +0.4
nutrient t2 H2 deepwell acetate FREE -2.4 -3.3 N.D. +0.3 +0.6
stress McCas_H2_complete Cesium chloride 41.6666666666667 mM -0.5 -4.6 N.D. +0.5 -0.2
stress McCas_H2_complete Ticarcillin 50 mM -0.9 -4.1 N.D. +0.4 -0.2
nutrient t2 H2 deepwell autotrophic conditions -2.3 -2.7 N.D. -0.3 +0.5
nutrient t2 H2 deepwell casamino FREE -2.1 -3.5 N.D. +0.4 +0.5
rich t2 H2 McCas deepwell complete -1.0 -4.5 N.D. +0.9 +0.1
nutrient t2 H2 deepwell vitamin and casamino FREE -2.5 -2.2 N.D. -0.0 +0.2
stress McCas_H2_complete silver chloride 0.5 mM +0.2 -5.1 N.D. +0.6 -0.1
stress McCas_H2_complete Thioridazine 0.1 mM -0.4 -4.3 N.D. +0.2 +0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -1.4 -4.0 N.D. +0.5 +0.7
nutrient t2 H2 deepwell vitamin and casamino FREE -2.2 -1.8 N.D. -0.4 +0.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +1.3 -5.0 N.D. -0.1 -0.0
no stress control McCas_H2_complete no stress control +0.3 -4.3 N.D. +0.4 -0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -1.1 -3.6 N.D. +0.1 +0.8
stress McCas_formate_complete arsenate 0.416666666666667 mM +0.9 -4.5 N.D. +0.1 -0.1
stress McCas_formate_complete mercury (II) chloride 0.227272727272727 mM +0.2 -4.4 N.D. +0.5 +0.3
nutrient t2 H2 deepwell casamino FREE -2.2 -1.9 N.D. +0.3 +0.4
stress McCas_H2_complete metronidazole 0.000833333333333333 -0.3 -3.6 N.D. +1.0 -0.4
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -1.7 -2.3 N.D. +0.5 +0.8
stress McCas_formate_complete Rifampicin 0.5 mM +1.1 +2.8 N.D. +1.2 -0.0
stress McCas_formate_complete Econazole nitrate salt 0.02 mM +1.5 +5.0 N.D. +0.8 -0.7
stress McCas_H2_complete Sulfaquinoxaline 0.1 mM +2.0 +5.2 N.D. +0.5 +0.2
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