Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS08315 and MMP_RS08320 are separated by 140 nucleotidesMMP_RS08320 and MMP_RS08325 are separated by 12 nucleotidesMMP_RS08325 and MMP_RS08330 are separated by 40 nucleotidesMMP_RS08330 and MMP_RS08335 are separated by 10 nucleotides MMP_RS08315: MMP_RS08315 - S-methyl-5-thioribose-1-phosphate isomerase, at 1,563,295 to 1,564,260 _RS08315 MMP_RS08320: MMP_RS08320 - molybdopterin molybdotransferase MoeA, at 1,564,401 to 1,565,609 _RS08320 MMP_RS08325: MMP_RS08325 - hypothetical protein, at 1,565,622 to 1,565,915 _RS08325 MMP_RS08330: MMP_RS08330 - NADH-quinone oxidoreductase subunit H, at 1,565,956 to 1,566,951 _RS08330 MMP_RS08335: MMP_RS08335 - NADH-quinone oxidoreductase subunit B family protein, at 1,566,962 to 1,567,405 _RS08335
Group Condition MMP_RS08315 MMP_RS08320 MMP_RS08325 MMP_RS08330 MMP_RS08335
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 +0.3 -6.0 +0.2 -2.9 -1.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations +0.2 -6.0 +0.5 -2.3 -1.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations +0.3 -5.6 +0.5 -2.1 -1.2
nutrient t2 H2 deepwell autotrophic conditions +0.5 -2.6 -0.0 -3.3 -2.3
nutrient t2 H2 deepwell casamino FREE +0.2 -1.1 +0.2 -4.2 -2.9
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.4 -3.0 +0.2 -4.0 -1.2
nutrient t2 H2 deepwell vitamin and casamino FREE +0.2 -1.8 +0.3 -3.9 -2.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations +0.2 -5.3 +0.5 -1.9 -0.9
nutrient t2 H2 deepwell autotrophic conditions +0.5 -1.6 +0.2 -3.6 -2.7
nutrient t2 H2 deepwell casamino FREE +1.0 -1.7 +0.5 -4.1 -2.9
nutrient t2 H2 deepwell vitamin and casamino FREE +0.6 -1.6 +0.6 -3.8 -2.8
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.5 -3.0 +0.2 -3.3 -1.5
nutrient t2 H2 deepwell casamino FREE +0.4 -2.2 +0.4 -3.6 -1.7
nutrient t2 H2 deepwell acetate FREE +0.0 -1.1 +1.0 -3.9 -2.3
nutrient t2 H2 deepwell vitamin and casamino FREE +0.5 -0.9 +0.7 -3.3 -3.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations +0.7 -4.8 +0.6 -2.2 -0.6
nutrient t2 H2 deepwell acetate and vitamin FREE +0.9 -1.4 +0.9 -3.4 -2.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +1.2 -5.0 +0.3 -1.4 +0.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +1.3 -5.3 +0.4 -1.4 +1.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +1.3 -5.5 +0.4 -0.1 +1.2
nitrogen source H2 N-free with 5mM Inosine -0.2 +5.0 -0.1 -3.1 +0.0
nitrogen source H2 N-free with 10mM L-Glutamic -0.9 +4.7 +0.6 -2.3 +0.1
nitrogen source H2 N-free with 10mM Gly-D-Asp -0.5 +5.7 +0.3 -2.0 -0.7
nitrogen source H2 N-free with 10mM NAG -0.3 +5.7 +0.1 -1.8 -0.8
nitrogen source H2 N-free with 10mM L-Glutamic -0.5 +5.3 +0.4 -2.1 -0.1
nitrogen source H2 N-free with 10mM NAG -0.1 +6.2 +0.3 -1.8 -1.2
nitrogen source H2 N-free with 10mM Parabanic Acid -0.3 +7.3 +0.2 -0.9 -0.2
stress H2 50 mM hypophosphite +0.9 +8.0 +0.3 -0.3 -0.4
stress H2 50 mM hypophosphite +0.7 +8.4 +0.1 +0.3 +0.1
stress McCas_formate_complete nitrate 35.7142857142857 mM -0.8 +5.6 -0.1 +3.7 +1.7
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