Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS08310 and MMP_RS08315 are separated by 10 nucleotidesMMP_RS08315 and MMP_RS08320 are separated by 140 nucleotidesMMP_RS08320 and MMP_RS08325 are separated by 12 nucleotidesMMP_RS08325 and MMP_RS08330 are separated by 40 nucleotides MMP_RS08310: MMP_RS08310 - TMEM165/GDT1 family protein, at 1,563,021 to 1,563,284 _RS08310 MMP_RS08315: MMP_RS08315 - S-methyl-5-thioribose-1-phosphate isomerase, at 1,563,295 to 1,564,260 _RS08315 MMP_RS08320: MMP_RS08320 - molybdopterin molybdotransferase MoeA, at 1,564,401 to 1,565,609 _RS08320 MMP_RS08325: MMP_RS08325 - hypothetical protein, at 1,565,622 to 1,565,915 _RS08325 MMP_RS08330: MMP_RS08330 - NADH-quinone oxidoreductase subunit H, at 1,565,956 to 1,566,951 _RS08330
Group Condition MMP_RS08310 MMP_RS08315 MMP_RS08320 MMP_RS08325 MMP_RS08330
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 +0.4 +0.3 -6.0 +0.2 -2.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations +0.6 +0.2 -6.0 +0.5 -2.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations +0.3 +0.2 -5.3 +0.5 -1.9
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.3 +0.4 -3.0 +0.2 -4.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations +1.0 +0.3 -5.6 +0.5 -2.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.3 +0.5 -3.0 +0.2 -3.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -0.0 +1.2 -5.0 +0.3 -1.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations +1.0 +0.7 -4.8 +0.6 -2.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +0.7 +1.3 -5.3 +0.4 -1.4
nutrient t2 H2 deepwell casamino FREE -0.1 +1.0 -1.7 +0.5 -4.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations +1.0 +0.2 -4.2 +0.6 -2.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations +1.1 +0.2 -4.0 +0.5 -2.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +0.8 +1.3 -5.5 +0.4 -0.1
nutrient t2 H2 deepwell acetate and vitamin FREE +1.4 +0.4 -1.4 +0.6 -3.8
nutrient t2 H2 deepwell acetate FREE +1.4 +0.0 -1.1 +1.0 -3.9
nutrient t2 H2 deepwell acetate and vitamin FREE +0.9 +0.9 -1.4 +0.9 -3.4
nitrogen source H2 N-free with 10mM L-Aspartic Acid +1.3 -0.3 +3.8 +0.4 -1.6
nitrogen source H2 N-free with 10mM L-Glutamic +0.6 -0.5 +5.3 +0.4 -2.1
nitrogen source H2 N-free with 10mM L-Glutamic +2.0 -0.9 +4.7 +0.6 -2.3
nitrogen source H2 N-free with 5mM Inosine +2.7 -0.2 +5.0 -0.1 -3.1
nitrogen source H2 N-free with 10mM Cytidine +1.4 -0.6 +4.9 +0.0 -1.6
nitrogen source H2 N-free with 10mM NAG +0.6 -0.3 +5.7 +0.1 -1.8
nitrogen source H2 N-free with 10mM Gly-D-Asp +0.9 -0.5 +5.7 +0.3 -2.0
nitrogen source H2 N-free with 10mM NAG +0.4 -0.1 +6.2 +0.3 -1.8
nitrogen source H2 N-free with 10mM Parabanic Acid +0.6 -0.5 +6.0 +0.2 -1.1
stress McCas_formate_complete nitrate 35.7142857142857 mM -2.7 -0.8 +5.6 -0.1 +3.7
nitrogen source H2 N-free with 10mM Parabanic Acid +0.4 -0.3 +7.3 +0.2 -0.9
nitrogen source H2 N-free with 5mM Inosine +3.3 -0.1 +5.5 +0.4 -1.7
stress H2 50 mM hypophosphite +0.1 +0.9 +8.0 +0.3 -0.3
stress H2 50 mM hypophosphite -0.2 +0.7 +8.4 +0.1 +0.3
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