Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS08220 and MMP_RS08225 are separated by 30 nucleotidesMMP_RS08225 and MMP_RS08230 are separated by 27 nucleotidesMMP_RS08230 and MMP_RS08235 are separated by 106 nucleotidesMMP_RS08235 and MMP_RS08240 are separated by 281 nucleotides MMP_RS08220: MMP_RS08220 - TrkA family potassium uptake protein, at 1,547,298 to 1,547,963 _RS08220 MMP_RS08225: MMP_RS08225 - RimK family alpha-L-glutamate ligase, at 1,547,994 to 1,548,800 _RS08225 MMP_RS08230: MMP_RS08230 - 50S ribosomal protein L11 methyltransferase, at 1,548,828 to 1,549,610 _RS08230 MMP_RS08235: MMP_RS08235 - hypothetical protein, at 1,549,717 to 1,549,944 _RS08235 MMP_RS08240: MMP_RS08240 - methanogenesis marker 16 metalloprotein, at 1,550,226 to 1,551,392 _RS08240
Group Condition MMP_RS08220 MMP_RS08225 MMP_RS08230 MMP_RS08235 MMP_RS08240
nutrient t2 Formate deepwell autotrophic conditions N.D. -0.7 +0.0 -0.0 -5.8
nutrient t2 Formate deepwell autotrophic conditions N.D. -0.5 +0.2 +0.0 -5.9
nutrient t2 Formate deepwell acetate and casamino FREE N.D. -1.0 -0.2 +0.2 -4.3
nutrient t2 Formate deepwell autotrophic conditions N.D. -0.4 +0.3 +0.1 -4.8
nutrient t2 Formate deepwell acetate and casamino FREE N.D. -0.8 -0.1 +0.1 -4.0
nutrient t2 Formate deepwell acetate and casamino FREE N.D. -0.7 -0.1 +0.2 -4.1
nutrient t1 Formate deepwell casamino FREE N.D. -0.2 -0.1 -0.2 -3.5
nutrient t2 Formate deepwell vitamin and casamino FREE N.D. -0.0 +0.0 -0.3 -3.4
nutrient t2 Formate deepwell vitamin and casamino FREE N.D. -0.1 +0.1 -0.1 -3.6
nutrient t2 H2 deepwell autotrophic conditions N.D. -0.2 +0.0 +0.0 -3.4
nutrient t1 Formate deepwell casamino FREE N.D. -0.1 -0.2 +0.1 -3.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE N.D. -0.1 -0.2 +0.2 -3.5
nutrient t1 Formate deepwell casamino FREE N.D. -0.2 -0.1 +0.3 -3.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE N.D. +0.1 -0.2 +0.3 -3.6
nitrogen source H2 N-free with 10mM L-Glutamic N.D. -2.2 -1.3 +0.5 -0.3
nitrogen source H2 N-free with 10mM L-Glutamic N.D. -2.2 -1.3 +0.3 +0.2
nutrient t2 H2 deepwell autotrophic conditions N.D. +0.1 +0.2 -0.0 -3.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. -2.5 +0.2 +0.5 -1.3
nutrient t2 Formate deepwell vitamin and casamino FREE N.D. +0.1 +0.1 -0.0 -3.3
nutrient t2 H2 deepwell autotrophic conditions N.D. +0.1 -0.2 +0.4 -2.9
nutrient t2 H2 deepwell acetate and casamino FREE N.D. -0.2 +0.2 +0.3 -2.8
nutrient t2 H2 deepwell autotrophic conditions N.D. +0.2 +0.3 +0.3 -3.0
nitrogen source H2 N-free with 10mM L-Methionine N.D. -1.8 -0.9 +0.8 -0.3
nitrogen source H2 N-free with 5mM Inosine N.D. -0.7 -0.8 +0.7 -1.3
nitrogen source H2 N-free with 10mM L-Threonine N.D. -0.1 -1.6 +0.9 -1.2
stress McCas_H2_complete Benzethonium chloride 0.00625 mM N.D. -0.4 -0.4 +3.3 -0.2
stress McCas_formate_complete metavanadate 4.54545454545455 mM N.D. -0.5 +0.0 +3.1 -0.1
stress Formate 100 mM hypophosphite N.D. +1.3 +0.5 +0.1 +1.9
stress Formate 100 mM hypophosphite N.D. +2.8 +0.8 +0.3 +3.3
stress Formate 100 mM hypophosphite N.D. +3.2 +1.0 +0.6 +3.6
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