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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS08145 and MMP_RS08150 are separated by 35 nucleotides
MMP_RS08150 and MMP_RS08155 are separated by 102 nucleotides
MMP_RS08155 and MMP_RS08160 are separated by 21 nucleotides
MMP_RS08160 and MMP_RS08165 are separated by 32 nucleotides
MMP_RS08145: MMP_RS08145 - polyamine aminopropyltransferase, at 1,533,965 to 1,534,807
_RS08145
MMP_RS08150: MMP_RS08150 - agmatinase, at 1,534,843 to 1,535,691
_RS08150
MMP_RS08155: MMP_RS08155 - hypothetical protein, at 1,535,794 to 1,536,036
_RS08155
MMP_RS08160: MMP_RS08160 - EamA family transporter, at 1,536,058 to 1,536,471
_RS08160
MMP_RS08165: MMP_RS08165 - phosphoglycerate dehydrogenase, at 1,536,504 to 1,538,075
_RS08165
Group
Condition
MMP
_RS08145
MMP
_RS08150
MMP
_RS08155
MMP
_RS08160
MMP
_RS08165
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
N.D.
N.D.
-9.3
+0.4
-1.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
N.D.
N.D.
-6.7
+0.6
-2.4
nitrogen source
H2 N-free with 10mM L-Aspartic Acid
N.D.
N.D.
-1.8
+0.2
-6.2
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
N.D.
-2.3
+0.3
-5.0
nutrient t2
H2 deepwell casamino FREE
N.D.
N.D.
-2.0
+0.3
-5.2
nitrogen source
H2 N-free with 10mM L-Histidine
N.D.
N.D.
-1.0
+0.3
-6.2
nitrogen source
H2 N-free with 10mM L-Carnitine
N.D.
N.D.
-1.9
+0.5
-5.4
nutrient t2
Formate deepwell autotrophic conditions
N.D.
N.D.
-1.5
+0.1
-5.3
nitrogen source
H2 N-free with 10mM L-Glutamic
N.D.
N.D.
-2.5
+0.2
-4.5
nitrogen source
H2 N-free with 10mM L-Arginine
N.D.
N.D.
-2.3
+0.7
-5.2
nitrogen source
H2 N-free with 2mM Thymine
N.D.
N.D.
-1.3
+0.4
-5.8
nitrogen source
H2 N-free with 10mM L-Asparagine
N.D.
N.D.
-1.9
+0.3
-5.0
nitrogen source
H2 N-free with 10mM L-Valine
N.D.
N.D.
-2.4
+0.5
-4.7
nitrogen source
H2 N-free with 10mM Gly-D-Asp
N.D.
N.D.
-2.3
+0.3
-4.4
nitrogen source
H2 N-free with 10mM D-glucosamine
N.D.
N.D.
-2.0
+0.2
-4.6
nitrogen source
H2 N-free with 10mM L-Histidine
N.D.
N.D.
-1.6
+0.3
-5.2
nitrogen source
H2 N-free with 10mM L-Ornithine
N.D.
N.D.
-2.4
+0.3
-4.4
nitrogen source
H2 N-free with 10mM L-Lysine
N.D.
N.D.
-2.6
+0.7
-4.5
nitrogen source
H2 N-free with 10mM L-Asparagine
N.D.
N.D.
-1.8
+0.5
-4.9
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
-2.2
+0.6
-4.6
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
N.D.
N.D.
-7.2
+0.9
+0.4
nitrogen source
H2 N-free with 10mM L-Citrulline
N.D.
N.D.
-2.2
+0.5
-4.2
nitrogen source
H2 N-free with 2.5mM Cytosine
N.D.
N.D.
-2.5
+0.5
-3.9
nitrogen source
H2 N-free with 10mM L-Ornithine
N.D.
N.D.
-1.8
+0.5
-4.5
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
-2.1
+0.6
-4.2
nitrogen source
H2 N-free with 10mM L-Aspartic Acid
N.D.
N.D.
-1.7
+0.5
-4.5
nitrogen source
H2 N-free with 10mM Gly-Glu
N.D.
N.D.
-1.9
+0.7
-4.5
nitrogen source
H2 N-free with 10mM L-Arginine
N.D.
N.D.
-2.0
+0.6
-4.3
nitrogen source
H2 N-free with 5mM Inosine
N.D.
N.D.
-1.8
+1.8
-4.6
nitrogen source
H2 N-free with 5mM Inosine
N.D.
N.D.
-1.9
+1.9
-3.5
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