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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS08135 and MMP_RS08140 are separated by 123 nucleotides
MMP_RS08140 and MMP_RS08145 overlap by 4 nucleotides
MMP_RS08145 and MMP_RS08150 are separated by 35 nucleotides
MMP_RS08150 and MMP_RS08155 are separated by 102 nucleotides
MMP_RS08135: MMP_RS08135 - arginine decarboxylase pyruvoyl-dependent, at 1,532,982 to 1,533,476
_RS08135
MMP_RS08140: MMP_RS08140 - adenosylmethionine decarboxylase, at 1,533,600 to 1,533,968
_RS08140
MMP_RS08145: MMP_RS08145 - polyamine aminopropyltransferase, at 1,533,965 to 1,534,807
_RS08145
MMP_RS08150: MMP_RS08150 - agmatinase, at 1,534,843 to 1,535,691
_RS08150
MMP_RS08155: MMP_RS08155 - hypothetical protein, at 1,535,794 to 1,536,036
_RS08155
Group
Condition
MMP
_RS08135
MMP
_RS08140
MMP
_RS08145
MMP
_RS08150
MMP
_RS08155
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
N.D.
N.D.
N.D.
N.D.
-9.3
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
N.D.
N.D.
N.D.
N.D.
-7.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
N.D.
N.D.
N.D.
N.D.
-6.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations
N.D.
N.D.
N.D.
N.D.
-3.3
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations
N.D.
N.D.
N.D.
N.D.
-2.6
nitrogen source
H2 N-free with 2.5mM Cytosine
N.D.
N.D.
N.D.
N.D.
-2.6
nitrogen source
H2 N-free with 10mM L-Lysine
N.D.
N.D.
N.D.
N.D.
-2.6
nitrogen source
H2 N-free with 10mM Gly-Glu
N.D.
N.D.
N.D.
N.D.
-2.5
nitrogen source
H2 N-free with 10mM L-Glutamic
N.D.
N.D.
N.D.
N.D.
-2.5
nitrogen source
H2 N-free with 2.5mM Cytosine
N.D.
N.D.
N.D.
N.D.
-2.5
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations
N.D.
N.D.
N.D.
N.D.
-2.4
nitrogen source
H2 N-free with 10mM Putrescine
N.D.
N.D.
N.D.
N.D.
-2.4
nitrogen source
H2 N-free with 10mM L-Valine
N.D.
N.D.
N.D.
N.D.
-2.4
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
N.D.
N.D.
N.D.
N.D.
-2.4
nitrogen source
H2 N-free with 10mM L-Ornithine
N.D.
N.D.
N.D.
N.D.
-2.4
nitrogen source
H2 N-free with 10mM Gly-D-Asp
N.D.
N.D.
N.D.
N.D.
-2.3
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations
N.D.
N.D.
N.D.
N.D.
-2.3
nitrogen source
H2 N-free with 10mM L-Carnitine
N.D.
N.D.
N.D.
N.D.
-2.3
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
N.D.
N.D.
N.D.
-2.3
nitrogen source
H2 N-free with 10mM L-Arginine
N.D.
N.D.
N.D.
N.D.
-2.3
stress
McCas_H2_complete metronidazole 0.000833333333333333
N.D.
N.D.
N.D.
N.D.
-2.2
nitrogen source
H2 N-free with 10mM L-Glutamic
N.D.
N.D.
N.D.
N.D.
-2.2
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
N.D.
N.D.
-2.2
nitrogen source
H2 N-free with 10mM Gly-D-Asp
N.D.
N.D.
N.D.
N.D.
-2.2
nitrogen source
H2 N-free with 10mM Parabanic Acid
N.D.
N.D.
N.D.
N.D.
-2.2
nitrogen source
H2 N-free with 10mM L-Citrulline
N.D.
N.D.
N.D.
N.D.
-2.2
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
N.D.
N.D.
-2.1
nitrogen source
H2 N-free with 10mM L-Valine
N.D.
N.D.
N.D.
N.D.
-2.1
stress
Formate 100 mM hypophosphite
N.D.
N.D.
N.D.
N.D.
+2.5
stress
Formate 100 mM hypophosphite
N.D.
N.D.
N.D.
N.D.
+2.5
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