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Homologs
Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS08065 and MMP_RS08070 are separated by 86 nucleotides
MMP_RS08070 and MMP_RS08075 overlap by 23 nucleotides
MMP_RS08075 and MMP_RS08080 are separated by 10 nucleotides
MMP_RS08080 and MMP_RS08085 are separated by 8 nucleotides
MMP_RS08065: MMP_RS08065 - tetrahydromethanopterin S-methyltransferase subunit H, at 1,519,462 to 1,520,421
_RS08065
MMP_RS08070: MMP_RS08070 - DUF2096 domain-containing protein, at 1,520,508 to 1,521,041
_RS08070
MMP_RS08075: MMP_RS08075 - DUF749 domain-containing protein, at 1,521,019 to 1,521,327
_RS08075
MMP_RS08080: MMP_RS08080 - YchF/TatD family DNA exonuclease, at 1,521,338 to 1,522,093
_RS08080
MMP_RS08085: MMP_RS08085 - hypothetical protein, at 1,522,102 to 1,523,037
_RS08085
Group
Condition
MMP
_RS08065
MMP
_RS08070
MMP
_RS08075
MMP
_RS08080
MMP
_RS08085
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations
N.D.
-10.9
-8.0
+0.4
+0.4
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
N.D.
-9.9
-4.9
+0.7
+0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
N.D.
-5.9
-2.8
+0.6
+0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations
N.D.
-5.0
-3.0
+0.5
+0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations
N.D.
-4.5
-3.1
+0.5
+0.3
stress
Formate with hypochlorite 5 mM
N.D.
-4.1
-2.1
+0.0
+0.2
stress
Formate with hypochlorite 5 mM
N.D.
-3.4
-2.6
-0.1
+0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations
N.D.
-3.9
-2.9
+0.7
+0.4
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
N.D.
-3.4
-2.8
+0.6
-0.1
stress
McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
-3.2
-2.2
-0.1
-0.1
stress
Formate 100 mM hypophosphite
N.D.
-2.7
-2.6
+0.1
+0.1
stress
Formate 100 mM hypophosphite
N.D.
-2.5
-2.5
-0.1
+0.1
stress
Formate 50 mM hypophosphite
N.D.
-3.4
-2.1
+0.3
+0.2
stress
Formate 100 mM hypophosphite
N.D.
-2.6
-2.2
-0.1
+0.4
stress
Formate 50 mM hypophosphite
N.D.
-3.0
-1.9
+0.3
+0.2
stress
McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
-3.0
-1.5
+0.1
-0.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations
N.D.
-2.7
-2.2
+0.4
+0.2
stress
Formate 50 mM hypophosphite
N.D.
-2.5
-1.8
+0.2
+0.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 10 generations
N.D.
-2.3
-1.5
+0.2
+0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations
N.D.
-2.5
-1.6
+0.4
+0.3
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations
N.D.
-2.2
-1.4
+0.3
+0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 10 generations
N.D.
-2.1
-1.4
+0.3
+0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations
N.D.
-2.3
-1.1
+0.2
+0.2
stress
H2 McCas with 1 hour oxygen exposure
N.D.
-2.3
-0.8
+0.5
+0.6
stress
H2 McCas with 40 minute oxygen exposure
N.D.
-2.5
-0.6
+0.6
+0.6
stress
H2 McCas with 20 minute oxygen exposure
N.D.
-2.1
-0.4
+0.4
+0.6
stress
H2 McCas with 1 hour oxygen exposure
N.D.
-2.0
-0.5
+0.7
+0.4
stress
H2 McCas with 40 minute oxygen exposure
N.D.
-2.3
-0.1
+0.5
+0.6
stress
H2 McCas with 40 minute oxygen exposure
N.D.
-2.3
-0.3
+0.5
+0.8
stress
Formate with nitrate 62.5 mM
N.D.
+1.7
+1.1
-0.3
+0.3
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