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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS07975 and MMP_RS07980 are separated by 26 nucleotides
MMP_RS07980 and MMP_RS07985 are separated by 195 nucleotides
MMP_RS07985 and MMP_RS07990 are separated by 160 nucleotides
MMP_RS07990 and MMP_RS07995 are separated by 129 nucleotides
MMP_RS07975: MMP_RS07975 - signal recognition particle protein Srp54, at 1,504,831 to 1,506,183
_RS07975
MMP_RS07980: MMP_RS07980 - UbiX family flavin prenyltransferase, at 1,506,210 to 1,506,767
_RS07980
MMP_RS07985: MMP_RS07985 - nitroreductase family protein, at 1,506,963 to 1,507,565
_RS07985
MMP_RS07990: MMP_RS07990 - tRNA-Leu, at 1,507,726 to 1,507,810
_RS07990
MMP_RS07995: MMP_RS07995 - tRNA-Met, at 1,507,940 to 1,508,054
_RS07995
Group
Condition
MMP
_RS07975
MMP
_RS07980
MMP
_RS07985
MMP
_RS07990
MMP
_RS07995
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
N.D.
N.D.
+0.6
N.D.
N.D.
nutrient t2
H2 deepwell acetate and vitamin FREE
N.D.
N.D.
+0.6
N.D.
N.D.
stress
H2 McCas with 0.1 mM Na2S
N.D.
N.D.
+0.7
N.D.
N.D.
stress
McCas_H2_complete Antimycin A 0.01 mM
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 10 mM Na2S
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 1 mM (NH4)2S control
N.D.
N.D.
+0.7
N.D.
N.D.
stress
McCas_H2_complete metronidazole 0.00833333333333333 mM
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 1 hour oxygen exposure
N.D.
N.D.
+0.7
N.D.
N.D.
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 40 minute oxygen exposure
N.D.
N.D.
+0.7
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 40 minute oxygen exposure
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 1 hour oxygen exposure
N.D.
N.D.
+0.7
N.D.
N.D.
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 1 mM Na2S
N.D.
N.D.
+0.7
N.D.
N.D.
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
+0.7
N.D.
N.D.
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 1 mM (NH4)2S control
N.D.
N.D.
+0.7
N.D.
N.D.
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
+0.7
N.D.
N.D.
stress
McCas_H2_complete 2-Mercaptopyridine N-oxide 0.02 mM
N.D.
N.D.
+0.7
N.D.
N.D.
nutrient t2
H2 deepwell acetate and vitamin FREE
N.D.
N.D.
+0.7
N.D.
N.D.
stress
H2 McCas with 5 minute oxygen exposure
N.D.
N.D.
+0.8
N.D.
N.D.
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
N.D.
N.D.
+0.8
N.D.
N.D.
stress
McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM
N.D.
N.D.
+0.8
N.D.
N.D.
stress
McCas_H2_complete Rifampicin 0.5 mM
N.D.
N.D.
+0.9
N.D.
N.D.
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
N.D.
N.D.
+0.9
N.D.
N.D.
stress
H2 McCas with 40 minute oxygen exposure
N.D.
N.D.
+0.9
N.D.
N.D.
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
N.D.
N.D.
+0.9
N.D.
N.D.
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
N.D.
N.D.
+1.0
N.D.
N.D.
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
N.D.
N.D.
+1.1
N.D.
N.D.
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