Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS07960 and MMP_RS07965 are separated by 21 nucleotidesMMP_RS07965 and MMP_RS07970 overlap by 4 nucleotidesMMP_RS07970 and MMP_RS07975 are separated by 138 nucleotidesMMP_RS07975 and MMP_RS07980 are separated by 26 nucleotides MMP_RS07960: MMP_RS07960 - sugar phosphate isomerase/epimerase, at 1,502,975 to 1,503,781 _RS07960 MMP_RS07965: MMP_RS07965 - NADPH-dependent F420 reductase, at 1,503,803 to 1,504,474 _RS07965 MMP_RS07970: MMP_RS07970 - hypothetical protein, at 1,504,471 to 1,504,692 _RS07970 MMP_RS07975: MMP_RS07975 - signal recognition particle protein Srp54, at 1,504,831 to 1,506,183 _RS07975 MMP_RS07980: MMP_RS07980 - UbiX family flavin prenyltransferase, at 1,506,210 to 1,506,767 _RS07980
Group Condition MMP_RS07960 MMP_RS07965 MMP_RS07970 MMP_RS07975 MMP_RS07980
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -4.5 N.D. +0.4 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -4.0 N.D. +0.2 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -4.1 N.D. +0.5 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -3.3 N.D. +0.1 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -2.8 N.D. +0.3 N.D. N.D.
stress McCas_H2_complete Sulfaquinoxaline 0.1 mM -2.3 N.D. -0.2 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -3.3 N.D. +0.9 N.D. N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Methionine -2.2 N.D. -0.1 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -2.3 N.D. +0.0 N.D. N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -2.1 N.D. -0.1 N.D. N.D.
stress McCas_formate_complete Sulfaquinoxaline 0.1 mM -2.2 N.D. +0.0 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -2.6 N.D. +0.6 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -2.3 N.D. +0.2 N.D. N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -2.0 N.D. +0.0 N.D. N.D.
stress McCas_H2_complete Sulfaquinoxaline 0.1 mM -2.2 N.D. +0.3 N.D. N.D.
nutrient t2 Formate deepwell autotrophic conditions -1.9 N.D. +0.2 N.D. N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Methionine -1.7 N.D. +0.3 N.D. N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -1.7 N.D. +0.4 N.D. N.D.
nutrient t2 Formate deepwell acetate FREE -1.5 N.D. +1.1 N.D. N.D.
stress McCas_formate_complete sulfate 125 mM +1.8 N.D. -1.0 N.D. N.D.
stress McCas_formate_complete sulfate 125 mM +2.0 N.D. -0.7 N.D. N.D.
stress McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM -0.4 N.D. +1.7 N.D. N.D.
stress McCas_formate_complete arsenate 0.416666666666667 mM +2.0 N.D. -0.4 N.D. N.D.
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM +2.2 N.D. -0.3 N.D. N.D.
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +1.8 N.D. +0.3 N.D. N.D.
stress McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM +1.3 N.D. +0.8 N.D. N.D.
stress Formate with Bacitracin 15.6 uM +2.3 N.D. +0.2 N.D. N.D.
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM +2.8 N.D. +0.2 N.D. N.D.
stress McCas_formate_complete nitrate 35.7142857142857 mM +3.0 N.D. +0.2 N.D. N.D.
stress McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM +0.5 N.D. +2.7 N.D. N.D.
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