Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS07720 and MMP_RS07725 are separated by 18 nucleotidesMMP_RS07725 and MMP_RS07730 are separated by 23 nucleotidesMMP_RS07730 and MMP_RS07735 are separated by 16 nucleotidesMMP_RS07735 and MMP_RS07740 are separated by 21 nucleotides MMP_RS07720: MMP_RS07720 - 4Fe-4S binding protein, at 1,462,535 to 1,462,951 _RS07720 MMP_RS07725: MMP_RS07725 - 4Fe-4S dicluster domain-containing protein, at 1,462,970 to 1,463,473 _RS07725 MMP_RS07730: MMP_RS07730 - pyruvate synthase subunit beta, at 1,463,497 to 1,464,393 _RS07730 MMP_RS07735: MMP_RS07735 - 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha, at 1,464,410 to 1,465,573 _RS07735 MMP_RS07740: MMP_RS07740 - 4Fe-4S binding protein, at 1,465,595 to 1,465,852 _RS07740
Group Condition MMP_RS07720 MMP_RS07725 MMP_RS07730 MMP_RS07735 MMP_RS07740
nutrient t2 Formate deepwell autotrophic conditions -5.9 +2.1 -6.1 -3.9 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -3.9 +0.9 -6.4 -4.1 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -4.4 +1.2 -6.1 -3.9 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -0.3 -1.1 -7.2 -4.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -0.4 -1.1 -7.1 -4.3 N.D.
nutrient t2 H2 deepwell vitamin and casamino FREE -0.6 -3.0 -5.7 -3.6 N.D.
nutrient t2 Formate deepwell autotrophic conditions -5.0 +2.0 -6.0 -3.8 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -3.7 +1.0 -6.1 -3.9 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -0.6 -2.3 -6.0 -3.7 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations +0.2 -0.4 -7.5 -4.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -0.0 -0.6 -7.2 -4.3 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -0.5 -1.9 -6.0 -3.7 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -1.7 -0.2 -6.2 -3.8 N.D.
nutrient t2 H2 deepwell vitamin and casamino FREE -0.6 -2.2 -5.4 -3.4 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -1.7 +0.0 -6.2 -3.8 N.D.
nutrient t1 Formate deepwell casamino FREE -1.5 +0.3 -6.3 -4.1 N.D.
nutrient t2 H2 deepwell autotrophic conditions -1.9 +0.3 -5.9 -3.9 N.D.
nutrient t2 Formate deepwell autotrophic conditions -5.9 +2.2 -4.5 -3.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -0.5 -1.9 -5.5 -3.3 N.D.
nutrient t2 H2 deepwell autotrophic conditions -2.2 +0.5 -5.7 -3.8 N.D.
nutrient t2 H2 deepwell autotrophic conditions -2.1 +0.0 -5.4 -3.6 N.D.
nutrient t2 H2 deepwell vitamin and casamino FREE -0.4 -2.3 -5.2 -3.2 N.D.
nutrient t2 H2 deepwell casamino FREE -0.0 -1.8 -5.7 -3.6 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.4 -0.7 -6.7 -4.1 N.D.
nutrient t1 Formate deepwell casamino FREE -1.5 +0.5 -6.1 -3.9 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -0.3 +0.3 -6.8 -4.1 N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE -1.4 +0.8 -6.0 -3.8 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +0.5 -0.6 -6.2 -3.8 N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE -1.5 +0.8 -6.0 -3.2 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.4 +1.7 -5.3 -3.8 N.D.
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