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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS07695 and MMP_RS07700 overlap by 4 nucleotides
MMP_RS07700 and MMP_RS07705 are separated by 17 nucleotides
MMP_RS07705 and MMP_RS07710 are separated by 48 nucleotides
MMP_RS07710 and MMP_RS07715 are separated by 567 nucleotides
MMP_RS07695: MMP_RS07695 - DUF3236 domain-containing protein, at 1,458,529 to 1,459,008
_RS07695
MMP_RS07700: MMP_RS07700 - DUF1188 domain-containing protein, at 1,459,005 to 1,459,787
_RS07700
MMP_RS07705: MMP_RS07705 - transcriptional regulator, at 1,459,805 to 1,460,317
_RS07705
MMP_RS07710: MMP_RS07710 - cell division protein FtsZ, at 1,460,366 to 1,461,463
_RS07710
MMP_RS07715: MMP_RS07715 - YfcE family phosphodiesterase, at 1,462,031 to 1,462,522
_RS07715
Group
Condition
MMP
_RS07695
MMP
_RS07700
MMP
_RS07705
MMP
_RS07710
MMP
_RS07715
rich t2
H2 McCas, 5g/L bicarb, 40 psi H2CO2
-6.8
-5.9
+0.1
-2.2
+0.3
nitrogen source
H2 N-free with 2mM Adenine
-3.4
-2.9
-2.0
-2.4
+0.2
nitrogen source
H2 N-free with 2.5mM Cytosine
-3.4
-3.1
-1.6
-2.5
+0.3
nitrogen source
H2 N-free with 2mM Adenine
-2.9
-2.5
-1.8
-2.7
+0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
+0.2
+0.3
-0.6
-9.4
+0.1
nitrogen source
H2 N-free with 10mM L-Histidine
-3.1
-2.7
-1.9
-2.0
+0.2
stress
H2 McCas with 40 minute oxygen exposure
-2.9
-3.3
-0.8
-2.4
+0.5
nitrogen source
H2 N-free with 10mM Thymidine
-2.2
-2.2
-2.0
-2.8
+0.4
nitrogen source
H2 N-free with 2.5mM Cytosine
-2.9
-2.3
-1.4
-2.2
+0.1
nitrogen source
H2 N-free with 10mM D-glucosamine
-2.6
-2.5
-1.3
-2.3
+0.3
nitrogen source
H2 N-free with 10mM D-glucosamine
-2.5
-2.3
-1.7
-2.1
+0.2
nitrogen source
H2 N-free with 10mM L-Glutamic
-3.3
-3.2
-0.3
-1.8
+0.4
nitrogen source
H2 N-free with 10mM L-Ornithine
-2.6
-2.3
-1.2
-2.2
+0.2
nitrogen source
H2 N-free with 10mM L-Lysine
-2.4
-2.6
-1.2
-2.1
+0.2
stress
McCas_H2_complete Ticarcillin 50 mM
-3.8
-3.4
-0.2
-0.9
+0.3
nutrient t2
H2 deepwell acetate FREE
-2.2
-0.9
-1.6
-3.9
+0.5
nitrogen source
H2 N-free with 10mM L-Tryptophan
-3.1
-2.7
-0.7
-1.7
+0.3
stress
H2 McCas with 1 hour oxygen exposure
-2.5
-2.5
-1.2
-2.1
+0.3
nitrogen source
H2 N-free with 10mM Thymidine
-2.6
-2.1
-1.2
-2.2
+0.4
nitrogen source
H2 N-free with 10mM L-Leucine
-2.3
-2.5
-1.2
-1.9
+0.4
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
-2.5
-2.3
-1.2
-1.9
+0.5
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations
+0.3
+0.2
-1.9
-6.0
+0.2
stress
McCas_formate_complete Rifampicin 0.5 mM
-3.3
-2.8
+1.4
-2.6
+0.6
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations
+1.4
+1.3
-1.7
-3.3
+0.7
stress
H2 McCas with 0.1 mM sulfite
-2.1
-1.8
+3.7
+2.0
+0.1
stress
H2 McCas with 10 mM thiosulfate
-1.6
-1.2
+3.6
+2.5
+0.1
stress
H2 McCas with 10 mM thiosulfate
-1.4
-1.4
+4.7
+3.5
+0.1
stress
McCas_H2_complete perchlorate 250 mM
-0.5
-0.1
+4.9
+4.0
-0.1
stress
McCas_formate_complete nitrate 35.7142857142857 mM
-1.3
-2.0
+8.9
+6.5
+0.1
stress
McCas_H2_complete nitrate 35.7142857142857 mM
-1.2
-0.7
+9.2
+6.4
+0.2
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