Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS07690 and MMP_RS07695 are separated by 24 nucleotidesMMP_RS07695 and MMP_RS07700 overlap by 4 nucleotidesMMP_RS07700 and MMP_RS07705 are separated by 17 nucleotidesMMP_RS07705 and MMP_RS07710 are separated by 48 nucleotides MMP_RS07690: MMP_RS07690 - phenylalanine--tRNA ligase subunit alpha, at 1,457,002 to 1,458,504 _RS07690 MMP_RS07695: MMP_RS07695 - DUF3236 domain-containing protein, at 1,458,529 to 1,459,008 _RS07695 MMP_RS07700: MMP_RS07700 - DUF1188 domain-containing protein, at 1,459,005 to 1,459,787 _RS07700 MMP_RS07705: MMP_RS07705 - transcriptional regulator, at 1,459,805 to 1,460,317 _RS07705 MMP_RS07710: MMP_RS07710 - cell division protein FtsZ, at 1,460,366 to 1,461,463 _RS07710
Group Condition MMP_RS07690 MMP_RS07695 MMP_RS07700 MMP_RS07705 MMP_RS07710
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. -6.8 -5.9 +0.1 -2.2
nitrogen source H2 N-free with 2mM Adenine N.D. -3.4 -2.9 -2.0 -2.4
nitrogen source H2 N-free with 2.5mM Cytosine N.D. -3.4 -3.1 -1.6 -2.5
nitrogen source H2 N-free with 2mM Adenine N.D. -2.9 -2.5 -1.8 -2.7
nitrogen source H2 N-free with 10mM L-Histidine N.D. -3.1 -2.7 -1.9 -2.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. +0.2 +0.3 -0.6 -9.4
stress H2 McCas with 40 minute oxygen exposure N.D. -2.9 -3.3 -0.8 -2.4
nitrogen source H2 N-free with 10mM Thymidine N.D. -2.2 -2.2 -2.0 -2.8
nitrogen source H2 N-free with 2.5mM Cytosine N.D. -2.9 -2.3 -1.4 -2.2
nitrogen source H2 N-free with 10mM D-glucosamine N.D. -2.6 -2.5 -1.3 -2.3
nitrogen source H2 N-free with 10mM D-glucosamine N.D. -2.5 -2.3 -1.7 -2.1
nutrient t2 H2 deepwell acetate FREE N.D. -2.2 -0.9 -1.6 -3.9
nitrogen source H2 N-free with 10mM L-Glutamic N.D. -3.3 -3.2 -0.3 -1.8
stress McCas_H2_complete Ticarcillin 50 mM N.D. -3.8 -3.4 -0.2 -0.9
nitrogen source H2 N-free with 10mM L-Ornithine N.D. -2.6 -2.3 -1.2 -2.2
nitrogen source H2 N-free with 10mM L-Tryptophan N.D. -3.1 -2.7 -0.7 -1.7
nitrogen source H2 N-free with 10mM L-Lysine N.D. -2.4 -2.6 -1.2 -2.1
stress H2 McCas with 1 hour oxygen exposure N.D. -2.5 -2.5 -1.2 -2.1
nitrogen source H2 N-free with 10mM Thymidine N.D. -2.6 -2.1 -1.2 -2.2
rich t2 H2 McCas deepwell complete N.D. -1.9 -1.5 -1.3 -3.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations N.D. +0.3 +0.2 -1.9 -6.0
stress McCas_formate_complete Rifampicin 0.5 mM N.D. -3.3 -2.8 +1.4 -2.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. +0.7 -0.0 +1.5 -6.0
stress H2 McCas with 0.1 mM sulfite N.D. -2.1 -1.8 +3.7 +2.0
stress H2 McCas with 10 mM thiosulfate N.D. -1.6 -1.2 +2.9 +2.4
stress H2 McCas with 10 mM thiosulfate N.D. -1.6 -1.2 +3.6 +2.5
stress H2 McCas with 10 mM thiosulfate N.D. -1.4 -1.4 +4.7 +3.5
stress McCas_H2_complete perchlorate 250 mM N.D. -0.5 -0.1 +4.9 +4.0
stress McCas_formate_complete nitrate 35.7142857142857 mM N.D. -1.3 -2.0 +8.9 +6.5
stress McCas_H2_complete nitrate 35.7142857142857 mM N.D. -1.2 -0.7 +9.2 +6.4
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