Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS07680 and MMP_RS07685 are separated by 13 nucleotidesMMP_RS07685 and MMP_RS07690 are separated by 79 nucleotidesMMP_RS07690 and MMP_RS07695 are separated by 24 nucleotidesMMP_RS07695 and MMP_RS07700 overlap by 4 nucleotides MMP_RS07680: MMP_RS07680 - DUF366 family protein, at 1,455,308 to 1,455,910 _RS07680 MMP_RS07685: MMP_RS07685 - TIGR01212 family radical SAM protein, at 1,455,924 to 1,456,922 _RS07685 MMP_RS07690: MMP_RS07690 - phenylalanine--tRNA ligase subunit alpha, at 1,457,002 to 1,458,504 _RS07690 MMP_RS07695: MMP_RS07695 - DUF3236 domain-containing protein, at 1,458,529 to 1,459,008 _RS07695 MMP_RS07700: MMP_RS07700 - DUF1188 domain-containing protein, at 1,459,005 to 1,459,787 _RS07700
Group Condition MMP_RS07680 MMP_RS07685 MMP_RS07690 MMP_RS07695 MMP_RS07700
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 +0.2 +0.1 N.D. -6.8 -5.9
nitrogen source H2 N-free with 2.5mM Cytosine -0.3 -1.9 N.D. -3.4 -3.1
stress McCas_H2_complete Ticarcillin 50 mM +0.6 -1.3 N.D. -3.8 -3.4
stress McCas_formate_complete Rifampicin 0.5 mM -0.4 -1.4 N.D. -3.3 -2.8
nitrogen source H2 N-free with 10mM L-Glutamic -0.0 -1.0 N.D. -3.3 -3.2
nitrogen source H2 N-free with 10mM L-Histidine -0.3 -1.3 N.D. -3.1 -2.7
nitrogen source H2 N-free with 2.5mM Cytosine -0.4 -1.9 N.D. -2.9 -2.3
nitrogen source H2 N-free with 10mM L-Asparagine -1.0 -1.3 N.D. -2.5 -2.4
nitrogen source H2 N-free with 10mM L-Methionine -0.7 -2.0 N.D. -2.3 -2.1
nitrogen source H2 N-free with 10mM L-Lysine -0.4 -1.9 N.D. -2.9 -2.0
nitrogen source H2 N-free with 10mM L-Lysine -0.4 -1.7 N.D. -2.4 -2.6
nitrogen source H2 N-free with 10mM Cytidine -0.3 -1.4 N.D. -2.8 -2.6
nitrogen source H2 N-free with 10mM L-Methionine -0.5 -1.8 N.D. -2.7 -2.0
nitrogen source H2 N-free with 10mM L-Tryptophan +0.3 -1.2 N.D. -3.1 -2.7
stress H2 McCas with 40 minute oxygen exposure +0.2 -0.8 N.D. -2.9 -3.3
nitrogen source H2 N-free with 10mM L-Leucine -0.5 -1.4 N.D. -2.3 -2.5
nitrogen source H2 N-free with 10mM L-Arginine -0.5 -1.6 N.D. -2.5 -2.0
nitrogen source H2 N-free with 10mM L-Tryptophan -0.3 -1.3 N.D. -2.8 -2.2
stress Formate with ticarcillin 50 mM -0.1 -0.4 N.D. -3.0 -3.1
stress McCas_H2_complete Ticarcillin 50 mM +0.4 -0.5 N.D. -3.4 -3.0
nitrogen source H2 N-free with 2mM Adenine +0.3 -0.4 N.D. -3.4 -2.9
nitrogen source H2 N-free with 10mM L-Arginine +0.1 -1.4 N.D. -2.9 -2.2
nitrogen source H2 N-free with 10mM L-Glutamic +0.3 -1.0 N.D. -2.8 -2.8
nitrogen source H2 N-free with 10mM Putrescine +0.2 -1.4 N.D. -2.8 -2.4
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM +1.0 -1.1 N.D. -2.4 -2.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations +0.2 -4.5 N.D. +1.4 +1.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations +0.2 -4.5 N.D. +1.4 +1.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations +0.5 -4.2 N.D. +1.4 +1.2
stress Formate 100 mM hypophosphite +1.1 -2.3 N.D. +2.7 +2.8
stress Formate 100 mM hypophosphite +0.7 -2.2 N.D. +2.8 +3.0
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