Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS07670 and MMP_RS07675 are separated by 105 nucleotidesMMP_RS07675 and MMP_RS07680 are separated by 99 nucleotidesMMP_RS07680 and MMP_RS07685 are separated by 13 nucleotidesMMP_RS07685 and MMP_RS07690 are separated by 79 nucleotides MMP_RS07670: MMP_RS07670 - orotate phosphoribosyltransferase, at 1,453,202 to 1,453,759 _RS07670 MMP_RS07675: MMP_RS07675 - S-layer protein, at 1,453,865 to 1,455,208 _RS07675 MMP_RS07680: MMP_RS07680 - DUF366 family protein, at 1,455,308 to 1,455,910 _RS07680 MMP_RS07685: MMP_RS07685 - TIGR01212 family radical SAM protein, at 1,455,924 to 1,456,922 _RS07685 MMP_RS07690: MMP_RS07690 - phenylalanine--tRNA ligase subunit alpha, at 1,457,002 to 1,458,504 _RS07690
Group Condition MMP_RS07670 MMP_RS07675 MMP_RS07680 MMP_RS07685 MMP_RS07690
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. -0.2 +0.1 -5.9 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. -0.2 +0.1 -5.6 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -0.1 +0.1 -4.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. +0.1 +0.2 -4.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. +0.0 +0.2 -4.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. -0.0 +0.5 -4.2 N.D.
nutrient t2 Formate deepwell acetate FREE N.D. +0.0 -0.9 -2.0 N.D.
nitrogen source H2 N-free with 10mM L-Methionine N.D. -0.1 -0.7 -2.0 N.D.
stress Formate 100 mM hypophosphite N.D. +0.1 +0.2 -3.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 10 generations N.D. -0.0 +0.3 -2.9 N.D.
nutrient t2 Formate deepwell acetate FREE N.D. -0.1 +0.2 -2.7 N.D.
nitrogen source H2 N-free with 10mM L-Methionine N.D. -0.2 -0.5 -1.8 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations N.D. -0.0 +0.2 -2.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations N.D. +0.1 +0.2 -2.5 N.D.
nutrient t2 Formate deepwell autotrophic conditions N.D. +0.1 +0.3 -2.4 N.D.
stress McCas_formate_complete Spiramycin 0.1 mM N.D. -0.1 +0.6 -2.6 N.D.
nitrogen source H2 N-free with 10mM L-Lysine N.D. +0.2 -0.4 -1.9 N.D.
nutrient t2 Formate deepwell acetate and vitamin FREE N.D. +0.0 +0.3 -2.3 N.D.
nutrient t2 Formate deepwell autotrophic conditions N.D. +0.0 +0.5 -2.5 N.D.
nutrient t1 Formate deepwell vitamin FREE N.D. +0.0 +0.3 -2.2 N.D.
nutrient t2 Formate deepwell autotrophic conditions N.D. +0.1 +0.3 -2.2 N.D.
stress Formate 50 mM hypophosphite N.D. +0.2 +0.4 -1.9 N.D.
stress Formate 50 mM hypophosphite N.D. +0.1 +0.5 -1.9 N.D.
stress Formate 100 mM hypophosphite N.D. +0.3 +0.7 -2.2 N.D.
stress Formate 100 mM hypophosphite N.D. +0.3 +1.1 -2.3 N.D.
nutrient t2 H2 deepwell acetate FREE N.D. +0.2 +0.6 -1.8 N.D.
no stress control McCas_H2_complete no stress control N.D. +0.4 +2.0 -0.9 N.D.
nitrogen source H2 N-free with 10mM L-tyrosine N.D. +0.1 +0.1 +2.4 N.D.
nitrogen source H2 N-free with 10mM Urea N.D. +0.0 +0.8 +2.3 N.D.
nitrogen source H2 N-free with 10mM L-tyrosine N.D. +0.1 +1.2 +2.1 N.D.
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