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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS07660 and MMP_RS07665 are separated by 2 nucleotides
MMP_RS07665 and MMP_RS07670 are separated by 45 nucleotides
MMP_RS07670 and MMP_RS07675 are separated by 105 nucleotides
MMP_RS07675 and MMP_RS07680 are separated by 99 nucleotides
MMP_RS07660: MMP_RS07660 - L-seryl-tRNA(Sec) kinase, at 1,451,118 to 1,451,885
_RS07660
MMP_RS07665: MMP_RS07665 - amidohydrolase, at 1,451,888 to 1,453,156
_RS07665
MMP_RS07670: MMP_RS07670 - orotate phosphoribosyltransferase, at 1,453,202 to 1,453,759
_RS07670
MMP_RS07675: MMP_RS07675 - S-layer protein, at 1,453,865 to 1,455,208
_RS07675
MMP_RS07680: MMP_RS07680 - DUF366 family protein, at 1,455,308 to 1,455,910
_RS07680
Group
Condition
MMP
_RS07660
MMP
_RS07665
MMP
_RS07670
MMP
_RS07675
MMP
_RS07680
stress
Formate McCas no stress control 2
N.D.
N.D.
N.D.
-0.1
-1.3
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
N.D.
N.D.
N.D.
+0.1
-1.4
rich t1
H2 McCas, 5g/L bicarb, 40 psi H2CO2
N.D.
N.D.
N.D.
-0.3
-0.9
nitrogen source
H2 N-free with 10mM L-Asparagine
N.D.
N.D.
N.D.
+0.0
-1.0
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
N.D.
N.D.
N.D.
+0.3
-1.0
nutrient t2
H2 deepwell vitamin FREE
N.D.
N.D.
N.D.
-0.1
+0.9
stress
Formate with Bacitracin 15.6 uM
N.D.
N.D.
N.D.
-0.1
+1.0
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
N.D.
N.D.
-0.0
+1.0
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.3
+0.7
stress
McCas_H2_complete sulfate 125 mM
N.D.
N.D.
N.D.
+0.4
+0.6
stress
McCas_formate_complete Thioridazine 0.05 mM
N.D.
N.D.
N.D.
+0.3
+0.7
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.1
+0.8
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
N.D.
N.D.
N.D.
-0.0
+1.0
stress
Formate 100 mM hypophosphite
N.D.
N.D.
N.D.
+0.3
+0.7
stress
McCas_H2_complete Chlorate 250 mM
N.D.
N.D.
N.D.
+0.3
+0.8
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
N.D.
N.D.
+0.1
+1.0
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
N.D.
N.D.
+0.2
+0.9
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.1
+1.1
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
N.D.
N.D.
N.D.
+0.5
+0.7
stress
McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM
N.D.
N.D.
N.D.
+0.2
+1.0
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.2
+0.9
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.1
+1.0
stress
McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
N.D.
N.D.
+0.0
+1.2
nitrogen source
H2 N-free with 10mM Thymidine
N.D.
N.D.
N.D.
+0.2
+1.0
nitrogen source
H2 N-free with 10mM L-tyrosine
N.D.
N.D.
N.D.
+0.1
+1.2
stress
McCas_H2_complete Fluorophosphate 62.5 mM
N.D.
N.D.
N.D.
+0.5
+0.8
stress
Formate 100 mM hypophosphite
N.D.
N.D.
N.D.
+0.3
+1.1
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
N.D.
N.D.
N.D.
+0.1
+1.3
nutrient t1
H2 deepwell vitamin FREE
N.D.
N.D.
N.D.
+0.1
+1.4
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.4
+2.0
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