Fitness for 5 genes in Methanococcus maripaludis S2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MMP_RS07550	MMP_RS07555	MMP_RS07560	MMP_RS07565	MMP_RS07570
stress	McCas_H2_complete Nitrofurantoin 0.1 mM	-0.1	-5.9	-0.0	N.D.	-0.4
stress	McCas_H2_complete Benzethonium chloride 0.003125 mM	-0.4	-5.6	+0.0	N.D.	-0.2
stress	McCas_H2_complete Novobiocin 0.05 mM	+0.1	-5.9	-0.1	N.D.	-0.2
stress	McCas_H2_complete Nitrofurantoin 0.1 mM	-0.1	-5.8	-0.1	N.D.	-0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations	+0.6	-5.1	-0.8	N.D.	-0.5
no stress control	McCas_H2_complete no stress control	-0.3	-5.7	+0.5	N.D.	-0.2
nutrient t2	Formate deepwell acetate and casamino FREE	-0.0	-5.2	+0.4	N.D.	+0.0
stress	McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM	+0.4	-5.5	+0.4	N.D.	-0.0
nutrient t2	H2 deepwell acetate FREE	+0.2	-4.7	+0.4	N.D.	-0.4
nutrient t2	H2 deepwell casamino FREE	+0.3	-5.0	+0.2	N.D.	+0.1
no stress control	McCas_H2_complete no stress control	+0.2	-4.8	+0.6	N.D.	-0.2
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE	+0.2	-4.8	+0.3	N.D.	+0.2
nutrient t2	H2 deepwell acetate and casamino FREE	+0.4	-5.1	+0.3	N.D.	+0.2
nutrient t2	H2 deepwell vitamin and casamino FREE	+0.5	-4.9	+0.3	N.D.	+0.1
nutrient t2	H2 deepwell casamino FREE	+0.2	-4.9	+0.2	N.D.	+0.4
stress	McCas_formate_complete 1,2-dimethyl-5-nitroimidazole 0.00416666666666667 mM	+0.1	-5.2	+0.6	N.D.	+0.4
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations	+0.6	-5.3	+0.2	N.D.	+0.5
nutrient t2	H2 deepwell acetate and vitamin FREE	+0.1	-4.7	+0.5	N.D.	+0.5
nutrient t2	H2 deepwell vitamin and casamino FREE	+0.2	-4.7	+0.5	N.D.	+0.4
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	+0.6	-4.5	+0.1	N.D.	+0.3
nutrient t2	H2 deepwell vitamin and casamino FREE	+0.4	-4.6	+0.5	N.D.	+0.3
nutrient t2	H2 deepwell acetate and casamino FREE	+0.5	-4.8	+0.8	N.D.	+0.4
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	+0.8	-4.4	+0.2	N.D.	+0.5
nutrient t2	H2 deepwell acetate and casamino FREE	+0.8	-4.1	-0.1	N.D.	+0.5
nutrient t2	H2 deepwell acetate FREE	+0.6	-4.8	+1.0	N.D.	+0.5
nitrogen source	H2 N-free with 10mM L-Alanine	+0.7	+3.5	+1.1	N.D.	-0.2
natural competence	H2 McCas- cells grown in liquid medium with neomycin	-0.3	+6.1	+0.5	N.D.	+0.2
natural competence	H2 McCas- cells grown in liquid medium with neomycin	-0.2	+7.7	+0.2	N.D.	+0.2
natural competence	H2 McCas- cells grown in liquid medium with neomycin	+0.0	+8.2	+0.4	N.D.	+0.1
stress	Formate with Neomycin 12.5 mM	+0.2	+9.1	+0.0	N.D.	-0.4