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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS07435 and MMP_RS07440 are separated by 39 nucleotides
MMP_RS07440 and MMP_RS07445 are separated by 184 nucleotides
MMP_RS07445 and MMP_RS07450 are separated by 5 nucleotides
MMP_RS07450 and MMP_RS07455 overlap by 14 nucleotides
MMP_RS07435: MMP_RS07435 - GMP synthase subunit A, at 1,416,060 to 1,416,629
_RS07435
MMP_RS07440: MMP_RS07440 - ZPR1 zinc finger domain-containing protein, at 1,416,669 to 1,417,241
_RS07440
MMP_RS07445: MMP_RS07445 - helix-turn-helix domain-containing protein, at 1,417,426 to 1,418,064
_RS07445
MMP_RS07450: MMP_RS07450 - energy-converting NiFe hydrogenase A subunit EhaA, at 1,418,070 to 1,418,336
_RS07450
MMP_RS07455: MMP_RS07455 - hypothetical protein, at 1,418,323 to 1,418,814
_RS07455
Group
Condition
MMP
_RS07435
MMP
_RS07440
MMP
_RS07445
MMP
_RS07450
MMP
_RS07455
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations
-7.5
N.D.
-10.5
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations
-7.1
N.D.
-10.1
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations
-7.2
N.D.
-9.6
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-6.6
N.D.
-9.6
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations
-7.2
N.D.
-7.8
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-4.8
N.D.
-9.2
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations
-7.3
N.D.
-6.7
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 10 generations
-5.4
N.D.
-8.3
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations
-7.1
N.D.
-6.0
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-1.4
N.D.
-9.6
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 10 generations
-3.7
N.D.
-6.7
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Lysine
-6.2
N.D.
-3.2
N.D.
N.D.
nitrogen source
H2 N-free with 2mM Thymine
-6.3
N.D.
-2.5
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations
-4.8
N.D.
-3.8
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 10 generations
-4.5
N.D.
-3.9
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 10 generations
-2.8
N.D.
-5.4
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations
-4.2
N.D.
-3.8
N.D.
N.D.
nitrogen source
H2 N-free with 2.5mM Cytosine
-4.9
N.D.
-2.9
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Asparagine
-4.9
N.D.
-2.7
N.D.
N.D.
nutrient t2
Formate deepwell autotrophic conditions
+0.4
N.D.
-7.9
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Arginine
-4.4
N.D.
-3.0
N.D.
N.D.
nutrient t2
Formate deepwell autotrophic conditions
+0.4
N.D.
-7.7
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Cytidine
-4.2
N.D.
-3.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Putrescine
-3.9
N.D.
-3.3
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations
+0.8
N.D.
-7.9
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Parabanic Acid
-4.3
N.D.
-2.6
N.D.
N.D.
nutrient t2
Formate deepwell autotrophic conditions
+0.8
N.D.
-7.5
N.D.
N.D.
nutrient t2
Formate deepwell acetate and casamino FREE
+0.4
N.D.
-7.0
N.D.
N.D.
nutrient t2
Formate deepwell acetate FREE
+0.3
N.D.
-6.7
N.D.
N.D.
nutrient t2
Formate deepwell acetate and casamino FREE
+0.7
N.D.
-6.8
N.D.
N.D.
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