Fitness for 5 genes in Methanococcus maripaludis S2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MMP_RS07415	MMP_RS07420	MMP_RS07425	MMP_RS07430	MMP_RS07435
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations	-2.5	-3.0	-8.0	N.D.	-4.8
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations	-2.1	-1.7	-5.7	N.D.	-7.2
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations	-2.9	-2.3	-4.0	N.D.	-7.5
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations	-2.4	-2.3	-3.9	N.D.	-7.3
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations	-2.9	-1.8	-4.0	N.D.	-7.2
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations	-2.4	-1.9	-4.2	N.D.	-7.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations	-2.5	-2.3	-3.7	N.D.	-7.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations	-1.7	-3.0	-3.7	N.D.	-6.6
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	+1.0	-2.2	-3.2	N.D.	-5.9
nutrient t2	H2 deepwell acetate and vitamin FREE	-0.3	-2.9	-2.9	N.D.	-4.0
nutrient t2	H2 deepwell vitamin FREE	-0.2	-2.7	-3.8	N.D.	-2.8
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations	-0.9	-1.6	-2.0	N.D.	-4.8
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations	-1.8	-3.1	-2.7	N.D.	-1.4
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2	-0.3	-1.9	-2.6	N.D.	-4.2
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 10 generations	-0.8	-1.0	-1.6	N.D.	-5.4
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 10 generations	-0.8	-1.4	-2.0	N.D.	-4.5
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	+0.0	-2.3	-3.0	N.D.	-3.2
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations	-1.2	-1.2	-1.7	N.D.	-4.2
nutrient t2	H2 deepwell acetate FREE	-0.3	-2.3	-2.8	N.D.	-2.9
nutrient t2	H2 deepwell acetate FREE	-0.5	-2.6	-2.4	N.D.	-2.6
hydrogen no stress control	H2 no stress control	+0.3	-1.1	-2.2	N.D.	-4.9
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2	-0.0	-2.1	-2.6	N.D.	-3.2
nitrogen source	H2 N-free with 10mM L-Lysine	-0.8	-1.2	+0.4	N.D.	-6.2
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE	+0.3	-1.7	-1.9	N.D.	-4.4
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	+0.1	-2.0	-2.7	N.D.	-3.1
hydrogen no stress control	H2 no stress control	+0.5	-1.0	-2.1	N.D.	-5.1
rich t2	H2 McCas deepwell complete	+0.5	-1.7	-2.8	N.D.	-3.7
rich t2	H2 McCas, 5g/L bicarb, 40 psi H2CO2	+0.8	-2.9	-2.8	N.D.	-1.9
nitrogen source	H2 N-free with 10mM L-Threonine	-1.0	+2.7	+1.7	N.D.	-2.8
stress	McCas_formate_complete Antimycin A 0.01 mM	+3.1	-0.9	-2.8	N.D.	+1.7