Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS07350 and MMP_RS07355 are separated by 54 nucleotidesMMP_RS07355 and MMP_RS07360 are separated by 71 nucleotidesMMP_RS07360 and MMP_RS07365 are separated by 21 nucleotidesMMP_RS07365 and MMP_RS07370 are separated by 84 nucleotides MMP_RS07350: MMP_RS07350 - preprotein translocase subunit Sec61beta, at 1,400,913 to 1,401,074 _RS07350 MMP_RS07355: MMP_RS07355 - transcription factor S, at 1,401,129 to 1,401,446 _RS07355 MMP_RS07360: MMP_RS07360 - TrkH family potassium uptake protein, at 1,401,518 to 1,402,954 _RS07360 MMP_RS07365: MMP_RS07365 - 2-phosphoglycerate kinase, at 1,402,976 to 1,403,914 _RS07365 MMP_RS07370: MMP_RS07370 - adenylosuccinate synthetase, at 1,403,999 to 1,405,015 _RS07370
Group Condition MMP_RS07350 MMP_RS07355 MMP_RS07360 MMP_RS07365 MMP_RS07370
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -7.4 -6.3 N.D. -1.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -8.3 +0.1 N.D. -3.8 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -6.1 -3.3 N.D. -1.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -8.3 +1.5 N.D. -2.8 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -0.3 -2.0 N.D. -6.9 N.D.
nitrogen source H2 N-free with 10mM Gly-D-Asp -0.7 -5.0 N.D. -3.3 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -0.3 -1.4 N.D. -7.2 N.D.
stress McCas_H2_complete Phenazine ethosulfate 0.1 mM -0.8 -6.9 N.D. -1.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -5.5 -1.8 N.D. -1.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -7.9 +2.5 N.D. -3.2 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -0.6 -0.9 N.D. -7.0 N.D.
nitrogen source H2 N-free with 10mM L-Lysine +0.4 -5.0 N.D. -3.7 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -0.7 -2.4 N.D. -5.0 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -1.5 -2.1 N.D. -4.5 N.D.
nutrient t2 H2 deepwell acetate and casamino FREE -0.8 -4.9 N.D. -2.4 N.D.
nutrient t2 Formate deepwell autotrophic conditions -0.5 -0.2 N.D. -7.0 N.D.
nutrient t2 Formate deepwell autotrophic conditions -0.5 -0.6 N.D. -6.7 N.D.
nitrogen source H2 N-free with 10mM L-Carnitine +0.0 -3.6 N.D. -4.1 N.D.
nutrient t2 Formate deepwell autotrophic conditions -0.7 +0.2 N.D. -7.0 N.D.
nitrogen source H2 N-free with 10mM Glycine -0.6 -4.3 N.D. -2.7 N.D.
nitrogen source H2 N-free with 2.5mM Cytosine -0.1 -4.3 N.D. -3.1 N.D.
nitrogen source H2 N-free with 2.5mM Cytosine +0.9 -5.3 N.D. -3.0 N.D.
stress McCas_formate_complete Chloride 250 mM -7.2 +0.8 N.D. -0.5 N.D.
nitrogen source H2 N-free with 10mM L-Methionine +0.7 -3.6 N.D. -3.9 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations -5.6 +1.0 N.D. -1.8 N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE -0.6 +0.7 N.D. -6.3 N.D.
nitrogen source H2 N-free with 10mM L-Leucine +0.7 -3.8 N.D. -3.0 N.D.
nitrogen source H2 N-free with 10mM Thymidine +1.4 -2.8 N.D. -3.3 N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine +0.5 +4.5 N.D. -3.1 N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine +0.1 +5.2 N.D. -2.9 N.D.
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