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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS07140 and MMP_RS07145 are separated by 46 nucleotides
MMP_RS07145 and MMP_RS07150 are separated by 45 nucleotides
MMP_RS07150 and MMP_RS07155 are separated by 55 nucleotides
MMP_RS07155 and MMP_RS09030 are separated by 107 nucleotides
MMP_RS07140: MMP_RS07140 - TIGR00341 family protein, at 1,366,033 to 1,367,040
_RS07140
MMP_RS07145: MMP_RS07145 - AmmeMemoRadiSam system protein B, at 1,367,087 to 1,367,941
_RS07145
MMP_RS07150: MMP_RS07150 - MTH895/ArsE family thioredoxin-like protein, at 1,367,987 to 1,368,232
_RS07150
MMP_RS07155: MMP_RS07155 - MFS transporter, at 1,368,288 to 1,369,436
_RS07155
MMP_RS09030: MMP_RS09030 - hypothetical protein, at 1,369,544 to 1,369,714
_RS09030
Group
Condition
MMP
_RS07140
MMP
_RS07145
MMP
_RS07150
MMP
_RS07155
MMP
_RS09030
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.1
+0.5
-1.1
+0.6
+0.0
stress
McCas_H2_complete Fluorophosphate 62.5 mM
-0.2
+0.9
+0.6
-0.3
-0.3
stress
McCas_H2_complete Chlorate 250 mM
+0.1
-0.2
-0.6
+0.4
+1.1
stress
McCas_formate_complete Econazole nitrate salt 0.02 mM
+0.2
-0.5
+0.2
+0.5
+0.6
nitrogen source
H2 N-free with 5mM Inosine
+0.4
-0.4
+0.6
+0.9
+0.1
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
-0.3
-0.1
+1.0
+0.6
+0.4
no stress control
McCas_H2_complete no stress control
-0.2
-0.1
+1.2
+0.5
+0.3
nitrogen source
H2 N-free with 10mM L-Threonine
+0.1
-0.4
+0.9
+0.5
+0.8
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
+0.1
+0.2
+0.6
-0.1
+1.1
stress
H2 McCas with 10 mM Na2S
+0.2
+0.3
+0.4
+0.7
+0.5
stress
H2 McCas with 1 hour oxygen exposure
+0.2
+0.4
+0.7
+0.5
+0.3
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.0
+0.3
+1.2
+0.5
+0.3
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.2
-0.0
+0.7
+0.6
+1.2
no stress control
McCas_H2_complete no stress control
+0.3
+0.3
+0.9
+0.8
-0.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
+0.2
+0.4
+0.6
+0.5
+0.5
stress
H2 McCas with 40 minute oxygen exposure
+0.3
+0.5
+0.3
+0.6
+0.4
stress
McCas_H2_complete Antimycin A 0.01 mM
+0.0
+0.4
+0.8
+0.7
+0.4
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
+0.2
+0.4
+0.4
+0.5
+0.9
stress
H2 McCas with 20 minute oxygen exposure
+0.3
+0.5
+0.6
+0.6
+0.4
stress
H2 McCas with 1 mM Na2S
+0.3
+0.3
+0.6
+0.6
+0.6
nutrient t2
H2 deepwell acetate FREE
+0.6
+0.5
+0.6
+0.6
+0.2
stress
H2 McCas with 40 minute oxygen exposure
+0.3
+0.4
+0.6
+0.6
+0.7
nutrient t2
H2 deepwell acetate FREE
+0.7
+0.3
+0.5
+0.6
+0.6
stress
H2 McCas with 40 minute oxygen exposure
+0.4
+0.5
+0.7
+0.6
+0.6
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.6
+0.7
+0.4
+0.5
+0.6
stress
H2 McCas with 1 mM Na2S
+0.3
+0.4
+0.9
+0.6
+0.7
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.4
+0.4
+0.8
+0.5
+0.8
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
+0.5
+0.2
+1.3
+0.5
+0.4
rich t2
H2 McCas deepwell complete
+0.5
+0.3
+1.6
+0.5
+0.4
stress
McCas_H2_complete sulfate 125 mM
-0.0
+0.6
+1.1
+0.3
+1.4
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