Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS07080 and MMP_RS07085 are separated by 118 nucleotidesMMP_RS07085 and MMP_RS07090 overlap by 1 nucleotidesMMP_RS07090 and MMP_RS07095 are separated by 89 nucleotidesMMP_RS07095 and MMP_RS07100 are separated by 32 nucleotides MMP_RS07080: MMP_RS07080 - formate--phosphoribosylaminoimidazolecarboxamide ligase, at 1,354,441 to 1,355,526 _RS07080 MMP_RS07085: MMP_RS07085 - ribonuclease HII, at 1,355,645 to 1,356,373 _RS07085 MMP_RS07090: MMP_RS07090 - tRNA (adenine-N1)-methyltransferase, at 1,356,373 to 1,357,251 _RS07090 MMP_RS07095: MMP_RS07095 - PspC domain-containing protein, at 1,357,341 to 1,357,583 _RS07095 MMP_RS07100: MMP_RS07100 - hypothetical protein, at 1,357,616 to 1,358,683 _RS07100
Group Condition MMP_RS07080 MMP_RS07085 MMP_RS07090 MMP_RS07095 MMP_RS07100
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. +0.1 -9.6 -0.1 +0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. +0.0 -6.9 +1.3 +0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. +0.2 -6.1 +0.6 +0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. +0.4 -5.9 +0.2 +0.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. +0.2 -5.4 +0.2 +0.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. +0.1 -5.0 +0.3 +0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. +0.1 -4.4 -0.1 +0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. +0.1 -4.6 +0.3 +0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. +0.3 -3.2 -0.1 -0.1
nitrogen source H2 N-free with 10mM L-Isoleucine N.D. -0.1 -3.1 +0.1 +0.2
nitrogen source H2 N-free with 10mM L-Glutamic N.D. -0.2 -2.9 +0.3 +0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. +0.3 -4.3 +1.0 +0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. +0.3 -2.5 -0.6 +0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE N.D. +0.2 -3.8 +1.3 -0.1
stress McCas_H2_complete Benzethonium chloride 0.003125 mM N.D. +0.5 -2.8 +0.1 -0.0
nitrogen source H2 N-free with 10mM L-Glutamic N.D. -0.1 -2.6 +0.6 +0.4
nutrient t1 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE N.D. +0.1 -2.6 +1.0 +0.0
nitrogen source H2 N-free with 2.5mM Cytosine N.D. -0.3 -2.2 +0.9 +0.3
nutrient t2 H2 deepwell acetate FREE N.D. +0.5 -1.9 +0.6 +0.4
nitrogen source H2 N-free with 2g/L casaminos N.D. +0.4 -1.9 +0.7 +0.5
nitrogen source H2 N-free with 10mM Thymidine N.D. +0.1 -1.9 +1.0 +0.5
nutrient t2 H2 deepwell acetate FREE N.D. +0.7 -1.7 +0.7 +0.4
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. +0.8 -1.8 +0.5 +0.6
stress McCas_H2_complete Nitrofurantoin 0.1 mM N.D. +0.3 -2.0 +1.5 +0.6
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. +0.3 -1.6 +1.1 +0.6
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM N.D. -0.0 -1.4 +1.3 +0.8
stress McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM N.D. +0.6 -1.5 +1.3 +0.2
stress H2 McCas with 40 minute oxygen exposure N.D. +0.3 -1.3 +0.9 +0.9
stress H2 McCas with 40 minute oxygen exposure N.D. +0.4 -1.2 +1.0 +0.7
stress Formate 100 mM hypophosphite N.D. -0.2 +3.1 +0.4 -0.0
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