Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS06980 and MMP_RS06985 are separated by 138 nucleotidesMMP_RS06985 and MMP_RS06990 are separated by 15 nucleotidesMMP_RS06990 and MMP_RS06995 are separated by 17 nucleotidesMMP_RS06995 and MMP_RS07000 are separated by 15 nucleotides MMP_RS06980: MMP_RS06980 - tRNA 2-thiocytidine biosynthesis TtcA family protein, at 1,332,600 to 1,333,574 _RS06980 MMP_RS06985: MMP_RS06985 - tRNA 4-thiouridine(8) synthase ThiI, at 1,333,713 to 1,334,864 _RS06985 MMP_RS06990: MMP_RS06990 - CatB-related O-acetyltransferase, at 1,334,880 to 1,335,560 _RS06990 MMP_RS06995: MMP_RS06995 - TIGR00269 family protein, at 1,335,578 to 1,336,513 _RS06995 MMP_RS07000: MMP_RS07000 - MoaD/ThiS family protein, at 1,336,529 to 1,336,783 _RS07000
Group Condition MMP_RS06980 MMP_RS06985 MMP_RS06990 MMP_RS06995 MMP_RS07000
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -9.6 N.D. -0.0 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -8.8 N.D. -0.1 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -8.7 N.D. +0.0 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -7.6 N.D. +0.1 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -7.3 N.D. -0.0 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -7.0 N.D. +0.0 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -6.5 N.D. +0.1 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -5.1 N.D. +0.1 N.D. N.D.
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -5.1 N.D. +0.3 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -4.0 N.D. +0.2 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -4.1 N.D. +0.7 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -3.1 N.D. -0.3 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -4.1 N.D. +0.7 N.D. N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE -3.2 N.D. -0.1 N.D. N.D.
nutrient t2 H2 deepwell vitamin FREE -3.7 N.D. +0.5 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.4 N.D. +0.2 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.6 N.D. +0.5 N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.6 N.D. +0.5 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.5 N.D. +0.5 N.D. N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE -3.4 N.D. +0.5 N.D. N.D.
stress H2 McCas with 40 minute oxygen exposure -3.2 N.D. +0.3 N.D. N.D.
stress H2 McCas with 1 mM Na2S -3.1 N.D. +0.2 N.D. N.D.
stress H2 McCas with 40 minute oxygen exposure -3.3 N.D. +0.4 N.D. N.D.
stress H2 McCas with 10 mM Na2S -3.1 N.D. +0.4 N.D. N.D.
stress H2 McCas with 40 minute oxygen exposure -2.9 N.D. +0.3 N.D. N.D.
stress H2 McCas with 1 mM Na2S -3.0 N.D. +0.4 N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.0 N.D. +0.9 N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -2.7 N.D. +0.7 N.D. N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE -2.7 N.D. +0.7 N.D. N.D.
nutrient t2 H2 deepwell acetate FREE -2.6 N.D. +0.9 N.D. N.D.
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