Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS06950 and MMP_RS08915 are separated by 189 nucleotidesMMP_RS08915 and MMP_RS06960 are separated by 27 nucleotidesMMP_RS06960 and MMP_RS06965 are separated by 16 nucleotidesMMP_RS06965 and MMP_RS06970 are separated by 6 nucleotides MMP_RS06950: MMP_RS06950 - histone family protein, at 1,327,452 to 1,327,652 _RS06950 MMP_RS08915: MMP_RS08915 - 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase, at 1,327,842 to 1,328,924 _RS08915 MMP_RS06960: MMP_RS06960 - NAD+ synthase, at 1,328,952 to 1,329,728 _RS06960 MMP_RS06965: MMP_RS06965 - TIGR04014 family B12-binding domain/radical SAM domain-containing protein, at 1,329,745 to 1,331,058 _RS06965 MMP_RS06970: MMP_RS06970 - ribosomal protein S18-alanine N-acetyltransferase, at 1,331,065 to 1,331,550 _RS06970
Group Condition MMP_RS06950 MMP_RS08915 MMP_RS06960 MMP_RS06965 MMP_RS06970
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -3.4 N.D. -1.3 -0.3
stress Formate with nitrate 62.5 mM N.D. -0.0 N.D. -3.0 -1.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. -3.1 N.D. -0.8 +0.0
stress McCas_H2_complete Sulfaquinoxaline 0.1 mM N.D. -1.3 N.D. -1.5 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. -3.3 N.D. -0.3 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. -2.9 N.D. -0.5 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. -2.7 N.D. -0.4 -0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. -2.2 N.D. -0.6 -0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. -2.7 N.D. -0.3 +0.1
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM N.D. -0.6 N.D. -1.0 -1.2
stress Formate with nitrate 62.5 mM N.D. +0.1 N.D. -1.9 -1.0
stress McCas_formate_complete arsenate 0.416666666666667 mM N.D. -1.4 N.D. -0.9 -0.2
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM N.D. -0.9 N.D. -0.7 -0.8
no stress control McCas_H2_complete no stress control N.D. -2.1 N.D. +0.2 -0.4
no stress control McCas_H2_complete no stress control N.D. -2.2 N.D. +0.5 -0.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -2.9 N.D. +0.4 +0.5
stress McCas_formate_complete Fluorophosphate 62.5 mM N.D. -1.7 N.D. +0.4 -0.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations N.D. -2.1 N.D. -0.2 +0.2
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. -1.2 N.D. +0.2 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. -2.3 N.D. +0.2 +0.3
no stress control McCas_H2_complete no stress control N.D. -1.5 N.D. +0.8 -0.7
stress McCas_H2_complete 8-hydroxy-nitroquinolone 0.0166666666666667 mM N.D. -1.7 N.D. +0.6 -0.3
nitrogen source H2 N-free with 10mM NAG N.D. -0.7 N.D. +0.7 -1.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. -1.7 N.D. +0.3 +0.3
stress McCas_H2_complete Hydroxylamine 1.04166666666667 mM N.D. -1.0 N.D. +0.9 -0.6
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -1.5 N.D. +0.3 +0.6
stress McCas_H2_complete Antimycin A 0.01 mM N.D. -0.7 N.D. +1.1 -0.6
stress McCas_H2_complete Irgasan 0.025 mM N.D. -1.1 N.D. +1.5 -0.2
stress McCas_H2_complete metronidazole 0.00833333333333333 mM N.D. +0.9 N.D. +0.6 -0.9
stress McCas_formate_complete dimetridazole 0.00416666666666667 mM N.D. +1.3 N.D. +0.9 -0.3
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