Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS06835 and MMP_RS06840 are separated by 38 nucleotidesMMP_RS06840 and MMP_RS06845 are separated by 37 nucleotidesMMP_RS06845 and MMP_RS06850 are separated by 37 nucleotidesMMP_RS06850 and MMP_RS06855 are separated by 31 nucleotides MMP_RS06835: MMP_RS06835 - 30S ribosomal protein S9, at 1,308,765 to 1,309,169 _RS06835 MMP_RS06840: MMP_RS06840 - DNA-directed RNA polymerase subunit N, at 1,309,208 to 1,309,414 _RS06840 MMP_RS06845: MMP_RS06845 - tRNA-Pro, at 1,309,452 to 1,309,525 _RS06845 MMP_RS06850: MMP_RS06850 - DNA-directed RNA polymerase subunit K, at 1,309,563 to 1,309,736 _RS06850 MMP_RS06855: MMP_RS06855 - hypothetical protein, at 1,309,768 to 1,310,703 _RS06855
Group Condition MMP_RS06835 MMP_RS06840 MMP_RS06845 MMP_RS06850 MMP_RS06855
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. -6.0 N.D. N.D. -2.5
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM N.D. -6.0 N.D. N.D. -1.2
nitrogen source H2 N-free with 2.5mM Cytosine N.D. -3.3 N.D. N.D. -3.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -1.6 N.D. N.D. -5.3
stress McCas_H2_complete Chloride 250 mM N.D. -6.4 N.D. N.D. -0.4
stress McCas_formate_complete Rifampicin 0.5 mM N.D. -5.8 N.D. N.D. -0.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. -2.3 N.D. N.D. -4.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. -2.0 N.D. N.D. -3.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. -1.9 N.D. N.D. -3.4
stress McCas_formate_complete Spiramycin 0.1 mM N.D. -2.8 N.D. N.D. -2.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. -0.9 N.D. N.D. -4.2
nitrogen source H2 N-free with 10mM L-Lysine N.D. -1.7 N.D. N.D. -3.4
nutrient t2 H2 deepwell acetate FREE N.D. -2.5 N.D. N.D. -2.5
nitrogen source H2 N-free with 10mM L-Arginine N.D. -1.7 N.D. N.D. -3.1
stress H2 McCas with 1 mM Na2S N.D. -3.1 N.D. N.D. -1.7
nitrogen source H2 N-free with 10mM Cytidine N.D. -2.4 N.D. N.D. -2.4
stress McCas_formate_complete Sulfaquinoxaline 0.1 mM N.D. -3.3 N.D. N.D. -1.5
nitrogen source H2 N-free with 10mM Cytidine N.D. -1.9 N.D. N.D. -2.8
stress McCas_H2_complete Thioridazine 0.1 mM N.D. -4.2 N.D. N.D. -0.5
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. -2.5 N.D. N.D. -2.1
nitrogen source H2 N-free with 10mM L-Tryptophan N.D. -1.9 N.D. N.D. -2.7
nitrogen source H2 N-free with 10mM L-Aspartic Acid N.D. -1.8 N.D. N.D. -2.8
rich t2 H2 McCas deepwell complete N.D. -2.3 N.D. N.D. -2.2
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE N.D. -3.4 N.D. N.D. -1.0
stress McCas_H2_complete Strontium chloride 125 mM N.D. -2.6 N.D. N.D. -1.8
stress McCas_formate_complete Econazole nitrate salt 0.02 mM N.D. -2.5 N.D. N.D. -1.8
stress McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM N.D. -4.8 N.D. N.D. +0.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. +2.0 N.D. N.D. -3.1
stress McCas_H2_complete metronidazole 0.000833333333333333 N.D. +3.6 N.D. N.D. -1.1
stress McCas_H2_complete dimetridazole 0.000833333333333333 mM N.D. +3.8 N.D. N.D. -1.2
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