Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS06725 and MMP_RS06730 are separated by 25 nucleotidesMMP_RS06730 and MMP_RS06735 are separated by 62 nucleotidesMMP_RS06735 and MMP_RS06740 are separated by 51 nucleotidesMMP_RS06740 and MMP_RS06745 are separated by 75 nucleotides MMP_RS06725: MMP_RS06725 - hypothetical protein, at 1,291,237 to 1,292,640 _RS06725 MMP_RS06730: MMP_RS06730 - phosphopantothenate/pantothenate synthetase, at 1,292,666 to 1,293,427 _RS06730 MMP_RS06735: MMP_RS06735 - class I SAM-dependent rRNA methyltransferase, at 1,293,490 to 1,294,632 _RS06735 MMP_RS06740: MMP_RS06740 - fructose-6-phosphate aldolase, at 1,294,684 to 1,295,331 _RS06740 MMP_RS06745: MMP_RS06745 - DUF2119 domain-containing protein, at 1,295,407 to 1,296,018 _RS06745
Group Condition MMP_RS06725 MMP_RS06730 MMP_RS06735 MMP_RS06740 MMP_RS06745
nutrient t2 H2 deepwell casamino FREE -4.1 -6.9 +0.4 N.D. +0.0
nutrient t2 H2 deepwell vitamin and casamino FREE -4.2 -6.8 +0.5 N.D. +0.2
rich t2 H2 McCas deepwell complete -3.6 -6.3 -0.6 N.D. +0.2
stress McCas_H2_complete Econazole nitrate salt 0.02 mM -2.4 -7.2 -0.6 N.D. +0.4
nutrient t2 H2 deepwell acetate and vitamin FREE -2.3 -6.4 -0.3 N.D. -0.3
nutrient t2 H2 deepwell autotrophic conditions -1.9 -6.9 -0.6 N.D. +0.0
stress H2 McCas with 10 mM Na2S -2.5 -7.3 +0.2 N.D. +0.3
nutrient t2 Formate deepwell autotrophic conditions -1.7 -7.1 -0.4 N.D. -0.1
no stress control McCas_H2_complete no stress control -2.5 -7.5 +0.2 N.D. +0.5
nutrient t2 H2 deepwell vitamin and casamino FREE -3.0 -6.3 +0.3 N.D. -0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -2.6 -6.5 -0.1 N.D. -0.1
nutrient t2 Formate deepwell autotrophic conditions -1.9 -7.1 -0.1 N.D. -0.2
nutrient t2 H2 deepwell acetate FREE -3.0 -6.4 -0.0 N.D. +0.2
nutrient t2 H2 deepwell casamino FREE -3.4 -5.6 -0.1 N.D. -0.2
nutrient t2 H2 deepwell vitamin FREE -2.7 -6.3 +0.6 N.D. -0.6
nutrient t2 H2 deepwell casamino FREE -3.5 -6.7 +0.7 N.D. +0.5
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.0 -7.1 -0.0 N.D. +0.3
nutrient t2 H2 deepwell acetate and casamino FREE -2.4 -6.8 +0.2 N.D. +0.3
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM -2.5 -6.5 +0.1 N.D. +0.2
nutrient t2 H2 deepwell acetate FREE -3.5 -5.4 -0.1 N.D. +0.4
nutrient t2 H2 deepwell vitamin and casamino FREE -3.2 -6.5 +0.4 N.D. +0.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -1.4 -7.0 +0.5 N.D. -0.4
nitrogen source H2 N-free with 10mM L-Arginine -3.1 -5.6 +0.1 N.D. +0.5
nutrient t2 H2 deepwell acetate and vitamin FREE -2.4 -6.5 +0.7 N.D. +0.4
stress McCas_formate_complete Rifampicin 0.5 mM -3.5 -6.0 +0.8 N.D. +1.2
nutrient t2 H2 deepwell acetate and vitamin FREE -2.6 -6.5 +1.1 N.D. +0.5
nutrient t2 H2 deepwell acetate and casamino FREE -2.7 -5.5 +0.0 N.D. +0.9
nutrient t2 H2 deepwell acetate and casamino FREE -2.1 -6.1 +0.3 N.D. +0.8
no stress control McCas_H2_complete no stress control -2.4 -5.4 +0.2 N.D. +1.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations +0.8 -7.4 +0.4 N.D. +0.5
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