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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS06635 and MMP_RS06640 are separated by 62 nucleotides
MMP_RS06640 and MMP_RS06645 are separated by 125 nucleotides
MMP_RS06645 and MMP_RS06650 are separated by 16 nucleotides
MMP_RS06650 and MMP_RS06655 are separated by 66 nucleotides
MMP_RS06635: MMP_RS06635 - UbiD family decarboxylase, at 1,271,031 to 1,272,308
_RS06635
MMP_RS06640: MMP_RS06640 - 50S ribosomal protein L16, at 1,272,371 to 1,272,892
_RS06640
MMP_RS06645: MMP_RS06645 - GTP-binding protein EngB, at 1,273,018 to 1,273,710
_RS06645
MMP_RS06650: MMP_RS06650 - glycoside hydrolase family 57 protein, at 1,273,727 to 1,274,950
_RS06650
MMP_RS06655: MMP_RS06655 - glycoside hydrolase family 15 protein, at 1,275,017 to 1,276,882
_RS06655
Group
Condition
MMP
_RS06635
MMP
_RS06640
MMP
_RS06645
MMP
_RS06650
MMP
_RS06655
stress
McCas_H2_complete Benzethonium chloride 0.00625 mM
N.D.
N.D.
N.D.
-0.6
-0.3
stress
McCas_formate_complete arsenate 0.416666666666667 mM
N.D.
N.D.
N.D.
-0.6
-0.3
stress
Formate 100 mM hypophosphite
N.D.
N.D.
N.D.
-1.0
+0.2
stress
McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM
N.D.
N.D.
N.D.
+0.1
-0.9
stress
Formate 100 mM hypophosphite
N.D.
N.D.
N.D.
-0.7
+0.2
stress
Formate 100 mM hypophosphite
N.D.
N.D.
N.D.
-0.5
+0.4
no stress control
McCas_formate_complete no stress control
N.D.
N.D.
N.D.
-0.5
+0.6
stress
McCas_H2_complete sulfate 125 mM
N.D.
N.D.
N.D.
-0.3
+0.6
rich t2
H2 McCas deepwell complete
N.D.
N.D.
N.D.
-0.4
+0.8
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
-0.2
+0.7
stress
McCas_H2_complete Spiramycin 0.1 mM
N.D.
N.D.
N.D.
-0.2
+0.8
stress
McCas_H2_complete Fluorophosphate 62.5 mM
N.D.
N.D.
N.D.
-0.1
+0.9
nitrogen source
H2 N-free with 2mM Adenosine
N.D.
N.D.
N.D.
+1.0
-0.1
nitrogen source
N2 fixation, H2 media
N.D.
N.D.
N.D.
+0.5
+0.4
nitrogen source
H2 N-free with 10mM L-Tryptophan
N.D.
N.D.
N.D.
+0.6
+0.3
nitrogen source
H2 N-free with 2.5mM Cytosine
N.D.
N.D.
N.D.
+0.8
+0.2
nitrogen source
H2 N-free with 10mM Gly-D-Asp
N.D.
N.D.
N.D.
+0.7
+0.3
nitrogen source
H2 N-free with 10mM L-Tryptophan
N.D.
N.D.
N.D.
+0.5
+0.5
nitrogen source
H2 N-free with 10mM Gly-Glu
N.D.
N.D.
N.D.
+0.7
+0.3
stress
McCas_formate_complete Spiramycin 0.1 mM
N.D.
N.D.
N.D.
+0.7
+0.3
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
N.D.
+0.3
+0.9
nitrogen source
H2 N-free with 10mM Cytidine
N.D.
N.D.
N.D.
+0.9
+0.2
nitrogen source
H2 N-free with 10mM L-Glutamic
N.D.
N.D.
N.D.
+0.8
+0.4
nitrogen source
H2 N-free with 10mM Cytidine
N.D.
N.D.
N.D.
+1.0
+0.2
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
N.D.
N.D.
N.D.
+0.8
+0.6
nitrogen source
H2 N-free with 2.5mM Cytosine
N.D.
N.D.
N.D.
+1.1
+0.4
nitrogen source
H2 N-free with 10mM L-tyrosine
N.D.
N.D.
N.D.
+1.2
+0.4
nitrogen source
H2 N-free with 10mM L-tyrosine
N.D.
N.D.
N.D.
+1.1
+1.0
nitrogen source
H2 N-free with 10mM Uridine
N.D.
N.D.
N.D.
+2.9
+0.4
nitrogen source
H2 N-free with 10mM Uridine
N.D.
N.D.
N.D.
+3.2
+0.4
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