Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS06580 and MMP_RS06585 are separated by 71 nucleotidesMMP_RS06585 and MMP_RS06590 are separated by 71 nucleotidesMMP_RS06590 and MMP_RS06595 are separated by 43 nucleotidesMMP_RS06595 and MMP_RS06600 are separated by 37 nucleotides MMP_RS06580: MMP_RS06580 - tRNA-Arg, at 1,263,591 to 1,263,665 _RS06580 MMP_RS06585: MMP_RS06585 - DMT family protein, at 1,263,737 to 1,264,075 _RS06585 MMP_RS06590: MMP_RS06590 - GNAT family N-acetyltransferase, at 1,264,147 to 1,264,653 _RS06590 MMP_RS06595: MMP_RS06595 - flagellar hook-basal body complex protein FliE, at 1,264,697 to 1,265,248 _RS06595 MMP_RS06600: MMP_RS06600 - class III signal peptide-containing protein, at 1,265,286 to 1,265,489 _RS06600
Group Condition MMP_RS06580 MMP_RS06585 MMP_RS06590 MMP_RS06595 MMP_RS06600
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. -0.2 -1.3 N.D. -5.3
stress McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM N.D. -1.0 +0.3 N.D. -4.9
stress McCas_H2_complete Rifampicin 0.5 mM N.D. -0.5 +0.2 N.D. -4.5
stress McCas_H2_complete sodium bromide 250 mM N.D. -1.0 +0.6 N.D. -4.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. -0.8 +0.6 N.D. -4.4
stress McCas_formate_complete Rifampicin 0.5 mM N.D. +0.5 -0.2 N.D. -4.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. +0.3 +0.3 N.D. -4.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. +0.4 +0.1 N.D. -4.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. +0.1 +0.4 N.D. -4.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -0.1 +0.7 N.D. -4.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. +0.2 +0.2 N.D. -4.3
stress McCas_formate_complete Antimycin A 0.01 mM N.D. -0.4 +0.9 N.D. -3.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. +0.1 +0.4 N.D. -3.9
stress McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM N.D. -1.0 +0.6 N.D. -2.8
stress McCas_H2_complete Chlorpromazine 0.0333333333333333 mM N.D. +0.3 -0.5 N.D. -3.0
stress McCas_formate_complete Novobiocin 0.025 mM N.D. -0.3 +0.5 N.D. -3.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 10 generations N.D. +0.2 +0.3 N.D. -3.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 10 generations N.D. +0.2 +0.3 N.D. -3.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. +0.5 +0.7 N.D. -4.0
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM N.D. +0.2 +0.8 N.D. -3.3
rich t2 H2 McCas deepwell complete N.D. +0.5 +0.8 N.D. -3.5
stress McCas_H2_complete Antimycin A 0.01 mM N.D. +0.5 +0.7 N.D. -3.4
nutrient t2 H2 deepwell acetate FREE N.D. +0.5 +0.9 N.D. -3.4
no stress control McCas_H2_complete no stress control N.D. +1.0 -0.6 N.D. -2.2
stress McCas_formate_complete Rifampicin 0.5 mM N.D. +0.2 +1.1 N.D. -2.8
stress McCas_H2_complete metavanadate 4.54545454545455 mM N.D. +0.3 +1.1 N.D. -2.4
no stress control McCas_H2_complete no stress control N.D. +1.9 -0.2 N.D. -2.4
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. +1.3 +0.7 N.D. -2.3
nutrient t2 H2 deepwell acetate FREE N.D. +2.1 -0.1 N.D. -2.1
natural competence H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin N.D. -0.7 +4.8 N.D. +0.5
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